RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CCL15Q16663 113 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 CLEC16AQ2KHT3 1053 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 ZBTB33Q86T24 672 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF677Q86XU0 584 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 RRAGCQ9HB90 399 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 APOBEC3GQ9HC16 384 aaKnown RBP19.45■□□□□ 0.7
SMPD3-211ENST00000568373 EPB41L5Q9HCM4 733 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 MIF4GDA9UHW6 222 aaKnown RBP19.45■□□□□ 0.7
SMPD3-211ENST00000568373 TNFSF9P41273 254 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 AARSP49588 968 aaKnown RBP eCLIP19.45■□□□□ 0.7
SMPD3-211ENST00000568373 AP3M2P53677 418 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 MCL1Q07820 350 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 LAMC2Q13753 1193 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 TFDP1Q14186 410 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 TAPT1Q6NXT6 567 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF653Q96CK0 615 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 VTA1Q9NP79 307 aa19.45■□□□□ 0.7
SMPD3-211ENST00000568373 CHORDC1Q9UHD1 332 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-211ENST00000568373 ZSCAN5CA6NGD5 496 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 ABLIM1O14639 778 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 OGTO15294 1046 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 ACO1P21399 889 aaKnown RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 NCOA4Q13772 614 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 EFCAB12Q6NXP0 572 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 SND1Q7KZF4 910 aaKnown RBP eCLIP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 WDR49Q8IV35 697 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 ABRAQ8N0Z2 381 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF564Q8TBZ8 553 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 BRI3BPQ8WY22 251 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 CCDC102AQ96A19 550 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 RPS6KC1Q96S38 1066 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 NUP85Q9BW27 656 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 MED4Q9NPJ6 270 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 UVRAGQ9P2Y5 699 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 PHACTR2O75167 634 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 CALCAP01258 141 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 FGGP02679 453 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 CLTAP09496 248 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 TBXAS1P24557 533 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 GCLCP48506 637 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 FAM193AP78312 1265 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 NOP14P78316 857 aaKnown RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 MKRN3Q13064 507 aaKnown RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 HSP90B2PQ58FF3 399 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 ALG3Q92685 438 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 CAVIN3Q969G5 261 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 RNPC3Q96LT9 517 aaKnown RBP19.44■□□□□ 0.7
SMPD3-211ENST00000568373 NLRP4Q96MN2 994 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 RNPEPQ9H4A4 650 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 MORF4L1Q9UBU8 362 aa19.44■□□□□ 0.7
SMPD3-211ENST00000568373 ACKR2O00590 384 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 SART1O43290 800 aaKnown RBP19.43■□□□□ 0.7
SMPD3-211ENST00000568373 STRNO43815 780 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 GH1P01241 217 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 GJB1P08034 283 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 UNGP13051 313 aaPredicted RBP19.43■□□□□ 0.7
SMPD3-211ENST00000568373 PROZP22891 400 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 CARSP49589 748 aaKnown RBP19.43■□□□□ 0.7
SMPD3-211ENST00000568373 CLCN3P51790 818 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 PAK2Q13177 524 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 MESDQ14696 234 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 GJC2Q5T442 439 aaPredicted RBP19.43■□□□□ 0.7
SMPD3-211ENST00000568373 TSHZ1Q6ZSZ6 1077 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 ANKRD23Q86SG2 305 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 UBL4BQ8N7F7 174 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 EVPLQ92817 2033 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 FZD8Q9H461 694 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 PLEKHA4Q9H4M7 779 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 NMRK2Q9NPI5 230 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 NUB1Q9Y5A7 615 aa19.43■□□□□ 0.7
SMPD3-211ENST00000568373 ESYT3A0FGR9 886 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 TMEM110-MUSTN1A8MSY1 372 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ASAP2O43150 1006 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 C22orf31O95567 290 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 LGALS2P05162 132 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ITGA4P13612 1032 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 COMTP21964 271 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 MPZL3Q6UWV2 235 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 MAMDC4Q6UXC1 1216 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF467Q7Z7K2 595 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 FAM71BQ8TC56 605 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ZBTB9Q96C00 473 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 NAP1L3Q99457 506 aaPredicted RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 DDX47Q9H0S4 455 aaKnown RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 SLITRK6Q9H5Y7 841 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 CPSF3Q9UKF6 684 aaKnown RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 IVNS1ABPQ9Y6Y0 642 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
SMPD3-211ENST00000568373 INO80B-WBP1J3KQ70 363 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 PTENP60484 403 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 FKBP1BP68106 108 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 DMTNQ08495 405 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 NNTQ13423 1086 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 CLUL1Q15846 466 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ZNF484Q5JVG2 852 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 PPTC7Q8NI37 304 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 CASKIN2Q8WXE0 1202 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 IFT81Q8WYA0 676 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ZBTB10Q96DT7 871 aa19.42■□□□□ 0.7
SMPD3-211ENST00000568373 ZSWIM1Q9BR11 485 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms