RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 MAEAQ7L5Y9 396 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 GPBP1Q86WP2 473 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 FAM20CQ8IXL6 584 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 C7orf31Q8N865 590 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 SYT2Q8N9I0 419 aaPredicted RBP8.58□□□□□ -1.04
SMG1-214ENST00000568038 C12orf50Q8NA57 414 aaPredicted RBP8.58□□□□□ -1.04
SMG1-214ENST00000568038 ZBTB10Q96DT7 871 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 PAGE5Q96GU1 130 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 GLT1D1Q96MS3 346 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 SENP6Q9GZR1 1112 aaPredicted RBP8.58□□□□□ -1.04
SMG1-214ENST00000568038 CUEDC2Q9H467 287 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 POLD4Q9HCU8 107 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 CYP26B1Q9NR63 512 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 SETD4Q9NVD3 440 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 HDAC6Q9UBN7 1215 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 USP25Q9UHP3 1055 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 FRMPD3Q5JV73 1810 aa8.58□□□□□ -1.04
SMG1-214ENST00000568038 PCNTO95613 3336 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 NPHP3-ACAD11A0A0J9YXS1 232 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 A0A1W2PQ45 241 aaPredicted RBP8.57□□□□□ -1.04
SMG1-214ENST00000568038 A0A1W2PQY0 241 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 MYMKA6NI61 221 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 RRN3P2A6NIE6 340 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 CYP11B2P19099 503 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 EN2P19622 333 aaPredicted RBP8.57□□□□□ -1.04
SMG1-214ENST00000568038 KLRC1P26715 233 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 CASP1P29466 404 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 POLGP54098 1239 aaPredicted RBP8.57□□□□□ -1.04
SMG1-214ENST00000568038 ZNF200P98182 395 aaPredicted RBP8.57□□□□□ -1.04
SMG1-214ENST00000568038 ITGA7Q13683 1181 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 TARBP2Q15633 366 aaKnown RBP8.57□□□□□ -1.04
SMG1-214ENST00000568038 CAMK4Q16566 473 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 ZNF484Q5JVG2 852 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 RINT1Q6NUQ1 792 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 DYMQ7RTS9 669 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 DIS3LQ8TF46 1054 aaKnown RBP8.57□□□□□ -1.04
SMG1-214ENST00000568038 TIGD1Q96MW7 591 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 BLZF1Q9H2G9 400 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 SUGCTQ9HAC7 445 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 STARD7Q9NQZ5 370 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 KBTBD4Q9NVX7 518 aa8.57□□□□□ -1.04
SMG1-214ENST00000568038 GRIN2DO15399 1336 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 NRCAMQ92823 1304 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
SMG1-214ENST00000568038 C17orf102A2RUQ5 167 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 KRT18P05783 430 aaKnown RBP8.56□□□□□ -1.04
SMG1-214ENST00000568038 ESRRAP11474 423 aaPredicted RBP8.56□□□□□ -1.04
SMG1-214ENST00000568038 SOX10P56693 466 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 ASIC1P78348 528 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 AMPD3Q01432 767 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 PNOCQ13519 176 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 EMC2Q15006 297 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 ARSHQ5FYA8 562 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 MARCH8Q5T0T0 291 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 EFCAB12Q6NXP0 572 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
SMG1-214ENST00000568038 C1orf186Q6ZWK4 172 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 LRRC71Q8N4P6 559 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 METTL13Q8N6R0 699 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 LMBR1Q8WVP7 490 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 ERCC4Q92889 916 aaPredicted RBP8.56□□□□□ -1.04
SMG1-214ENST00000568038 TMEM143Q96AN5 459 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 CCDC34Q96HJ3 373 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 ABHD8Q96I13 439 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 CEP89Q96ST8 783 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 LRRC27Q9C0I9 530 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
SMG1-214ENST00000568038 NUP62CLQ9H1M0 184 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 TNMDQ9H2S6 317 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 CLSTN2Q9H4D0 955 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 ZHX3Q9H4I2 956 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 MAGEF1Q9HAY2 307 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 ATP6V0A4Q9HBG4 840 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 GTF2IRD1Q9UHL9 959 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 COL1A2P08123 1366 aa8.56□□□□□ -1.04
SMG1-214ENST00000568038 SCN10AQ9Y5Y9 1956 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 KAT6AQ92794 2004 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 A0A1W2PP55 124 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 RSPH10B2B2RC85 870 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 ARVCFO00192 962 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 MAGEB2O15479 319 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 TREHO43280 583 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 HIP1RO75146 1068 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 MED26O95402 600 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 C22orf31O95567 290 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 RSPH10BP0C881 870 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 GNAT1P11488 350 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 IDEP14735 1019 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 CLCN3P51790 818 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 CUL4BQ13620 913 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 GIT2Q14161 759 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 POSTNQ15063 836 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 SPRED3Q2MJR0 410 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 SKOR2Q2VWA4 1001 aaPredicted RBP8.55□□□□□ -1.04
SMG1-214ENST00000568038 FAM102BQ5T8I3 360 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
SMG1-214ENST00000568038 MTHFD1LQ6UB35 978 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms