RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 PDCD11Q14690 1871 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 FRMPD3Q5JV73 1810 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 RASSF10A6NK89 507 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 DCDC2CA8MYV0 355 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 BTBD19C9JJ37 291 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 TMPRSS2O15393 492 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 GAS2O43903 313 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 PRPF6O94906 941 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CELF2O95319 508 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 KRT18P05783 430 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 PGK2P07205 417 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 RAB6AP20340 208 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 EDNRBP24530 442 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 NMT1P30419 496 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 GBP2P32456 591 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 KLK7P49862 253 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 TPD52L1Q16890 204 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 HERC4Q5GLZ8 1057 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 MIIPQ5JXC2 388 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 TMEM63BQ5T3F8 832 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CST9Q5W186 159 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CDPF1Q6NVV7 123 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 KSR1Q8IVT5 923 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 NELFCDQ8IXH7 590 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CCDC65Q8IXS2 484 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 MYOCDQ8IZQ8 938 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 ANKRD35Q8N283 1001 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CSGALNACT2Q8N6G5 542 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 TC2NQ8N9U0 490 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 PHC3Q8NDX5 983 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 ZNF507Q8TCN5 953 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 NSUN6Q8TEA1 469 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 FBLIM1Q8WUP2 373 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CCDC47Q96A33 483 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 GPRASP2Q96D09 838 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 NOC4LQ9BVI4 516 aaKnown RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 LRRC27Q9C0I9 530 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 ZHX3Q9H4I2 956 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 THAP9Q9H5L6 903 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 GBA2Q9HCG7 927 aaPredicted RBP6.32□□□□□ -1.4
SF3B3-210ENST00000567654 IMPACTQ9P2X3 320 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 PNMA2Q9UL42 364 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 PCDHGC5Q9Y5F6 944 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 CITO14578 2027 aa6.32□□□□□ -1.4
SF3B3-210ENST00000567654 DNAJC25-GNG10A0A024R161 153 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 CCL15-CCL14A0A0B4J2E2 113 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 LRRC10BA6NIK2 292 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 B4DLN1 442 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 ARIH2O95376 493 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 PF4P02776 101 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 GYPCP04921 128 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 TPM3P06753 285 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 ICAM3P32942 547 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 QARSP47897 775 aaKnown RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 RARRES1P49788 294 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 FXR1P51114 621 aaKnown RBP eCLIP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 ADKP55263 362 aaKnown RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 NPEPPSP55786 919 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 SOX10P56693 466 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 ERVK-24P63145 666 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 SP4Q02446 784 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 RBL2Q08999 1139 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 SNAPC2Q13487 334 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 STIM1Q13586 685 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 INPP5AQ14642 412 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 LRRC14Q15048 493 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 CCL15Q16663 113 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 RSPO4Q2I0M5 234 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 ZC2HC1CQ53FD0 456 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 SEPT14Q6ZU15 432 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 MAEAQ7L5Y9 396 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 EEPD1Q7L9B9 569 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 TRMT1LQ7Z2T5 733 aaKnown RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 C12orf40Q86WS4 652 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 CREBRFQ8IUR6 639 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 CCDC60Q8IWA6 550 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 ZC3H3Q8IXZ2 948 aaKnown RBP6.31□□□□□ -1.4
SF3B3-210ENST00000567654 MB21D1Q8N884 522 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 CCDC150Q8NCX0 1101 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 NEK9Q8TD19 979 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 PTPN18Q99952 460 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 TMX1Q9H3N1 280 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 KRT82Q9NSB4 513 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 TBC1D22BQ9NU19 505 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 GGT7Q9UJ14 662 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 CYP8B1Q9UNU6 501 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 PCDHGB7Q9Y5F8 929 aa6.31□□□□□ -1.4
SF3B3-210ENST00000567654 PFASO15067 1338 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 NFASCO94856 1347 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 ITIH6Q6UXX5 1313 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 SYNGAP1Q96PV0 1343 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 IGSF9BQ9UPX0 1349 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 PCNTO95613 3336 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 GSTTP1A0A1W2PQM5 241 aa6.3□□□□□ -1.4
SF3B3-210ENST00000567654 BICDL2A1A5D9 508 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms