RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TIGD5Q53EQ6 642 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 COBLL1Q53SF7 1204 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 SYCP3Q8IZU3 236 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 GSDMAQ96QA5 445 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 NSUN3Q9H649 340 aaKnown RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 RPF1Q9H9Y2 349 aaKnown RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 TLR9Q9NR96 1032 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 CHST7Q9NS84 486 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 RAPGEFL1Q9UHV5 662 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
RNF40-211ENST00000567365 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 IRAK3Q9Y616 596 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 VWA8A3KMH1 1905 aa13.51□□□□□ -0.25
RNF40-211ENST00000567365 KINO60870 393 aaKnown RBP13.5□□□□□ -0.25
RNF40-211ENST00000567365 KIF4AO95239 1232 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
RNF40-211ENST00000567365 CTSAP10619 480 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 CYP3A5P20815 502 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 LRPAP1P30533 357 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 MATR3P43243 847 aaKnown RBP eCLIP13.5□□□□□ -0.25
RNF40-211ENST00000567365 OR1G1P47890 313 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 KRT17Q04695 432 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 KCNC3Q14003 757 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 ZCWPW2Q504Y3 356 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 PDE12Q6L8Q7 609 aaKnown RBP13.5□□□□□ -0.25
RNF40-211ENST00000567365 ADGRD2Q7Z7M1 963 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 BRSK2Q8IWQ3 736 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 CD302Q8IX05 232 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 NELFCDQ8IXH7 590 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 GPR65Q8IYL9 337 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
RNF40-211ENST00000567365 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 UROC1Q96N76 676 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 COLEC11Q9BWP8 271 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 GPR62Q9BZJ7 368 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 GZF1Q9H116 711 aaPredicted RBP13.5□□□□□ -0.25
RNF40-211ENST00000567365 ASB7Q9H672 318 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 GOLGA2P5Q9HBQ8 144 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
RNF40-211ENST00000567365 SLC38A7Q9NVC3 462 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 HSPBP1Q9NZL4 362 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 ADAM28Q9UKQ2 775 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 DERAQ9Y315 318 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 C2CD2Q9Y426 696 aa13.5□□□□□ -0.25
RNF40-211ENST00000567365 MUC3AQ02505 3323 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 C5orf42Q9H799 3197 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 HIDE1A8MVS5 230 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 PDXKO00764 312 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 SOD2P04179 222 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 BMP6P22004 513 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 RPL9P32969 192 aaKnown RBP13.49□□□□□ -0.25
RNF40-211ENST00000567365 CLCNKBP51801 687 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 SPAG1Q07617 926 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 HYAL1Q12794 435 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 CCDC85BQ15834 202 aaPredicted RBP13.49□□□□□ -0.25
RNF40-211ENST00000567365 NFIL3Q16649 462 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 KIAA0319Q5VV43 1072 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 SPATA1Q5VX52 437 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 ARMCX5Q6P1M9 558 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 FUT10Q6P4F1 479 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 DCLRE1AQ6PJP8 1040 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 HS2ST1Q7LGA3 356 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 SLC9A9Q8IVB4 645 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 VPS52Q8N1B4 723 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 GPD1LQ8N335 351 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 MRPL43Q8N983 215 aaKnown RBP13.49□□□□□ -0.25
RNF40-211ENST00000567365 RABGGTAQ92696 567 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 HERC2P3Q9BVR0 1158 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 PCIF1Q9H4Z3 704 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 STK39Q9UEW8 545 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 PUF60Q9UHX1 559 aaKnown RBP13.49□□□□□ -0.25
RNF40-211ENST00000567365 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
RNF40-211ENST00000567365 TRAF3IP3Q9Y228 551 aa13.49□□□□□ -0.25
RNF40-211ENST00000567365 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.49□□□□□ -0.25
RNF40-211ENST00000567365 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 GOLGA8IPA6NC78 632 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 C2orf71A6NGG8 1288 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 GOLGA8JA6NMD2 632 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 TNFRSF10AO00220 468 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 CLIC2O15247 247 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 NFICP08651 508 aa13.48□□□□□ -0.25
RNF40-211ENST00000567365 AARSP49588 968 aaKnown RBP eCLIP13.48□□□□□ -0.25
RNF40-211ENST00000567365 MCCD1P59942 119 aaPredicted RBP13.48□□□□□ -0.25
RNF40-211ENST00000567365 DSG1Q02413 1049 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms