RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 AGPAT5Q9NUQ2 364 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 PCDHB9Q9Y5E1 797 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 STK24Q9Y6E0 443 aa10.84□□□□□ -0.67
CAPN3-216ENST00000567071 ATG2BQ96BY7 2078 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 ERICH2A1L162 156 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 WDR27A2RRH5 827 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 ARL5CA6NH57 179 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 DCLK1O15075 740 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 MICAL2O94851 1124 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 MLH1P40692 756 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 DHPSP49366 369 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-216ENST00000567071 SCNN1GP51170 649 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 CFHR1Q03591 330 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 USP39Q53GS9 565 aaKnown RBP10.83□□□□□ -0.68
CAPN3-216ENST00000567071 RTP2Q5QGT7 225 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 CYP4A22Q5TCH4 519 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 PMS2CLQ68D20 193 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 ZNF746Q6NUN9 644 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-216ENST00000567071 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-216ENST00000567071 HACE1Q8IYU2 909 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 PIP4K2CQ8TBX8 421 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 PIGKQ92643 395 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 CRELD1Q96HD1 420 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 SLITRK6Q9H5Y7 841 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 APOBEC2Q9Y235 224 aaKnown RBP10.83□□□□□ -0.68
CAPN3-216ENST00000567071 SAMM50Q9Y512 469 aa10.83□□□□□ -0.68
CAPN3-216ENST00000567071 VWA8A3KMH1 1905 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 HEPACAM2A8MVW5 462 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ARNTLO00327 626 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 OPHN1O60890 802 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 APBB3O95704 486 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 OATP04181 439 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ENGP17813 658 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ELF1P32519 619 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 OR1D2P34982 312 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 VIPR2P41587 438 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 DPP6P42658 865 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 SRSF1Q07955 248 aaKnown RBP eCLIP10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ELAVL2Q12926 359 aaKnown RBP10.82□□□□□ -0.68
CAPN3-216ENST00000567071 RAB33AQ14088 237 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 PTPAQ15257 358 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 MAPK6Q16659 721 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
CAPN3-216ENST00000567071 FAM171A1Q5VUB5 890 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 TXNDC11Q6PKC3 985 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ZNF589Q86UQ0 364 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-216ENST00000567071 RHPN2Q8IUC4 686 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ELMOD1Q8N336 334 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-216ENST00000567071 NLRP4Q96MN2 994 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 DCBLD2Q96PD2 775 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 HHIPQ96QV1 700 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 GAD1Q99259 594 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 SPZ1Q9BXG8 430 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 TRPV4Q9HBA0 871 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 PCDHA10Q9Y5I2 948 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
CAPN3-216ENST00000567071 GOLGA4Q13439 2230 aaKnown RBP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 IPO5O00410 1097 aaKnown RBP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 MEIS1O00470 390 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 SGSM2O43147 1006 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 DGKEP52429 567 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 SPIRE1Q08AE8 756 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 GRSF1Q12849 480 aaKnown RBP eCLIP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 HSP90AA2PQ14568 343 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 SEC23AQ15436 765 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 WDR44Q5JSH3 913 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 IQCEQ6IPM2 695 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 NIPA1Q7RTP0 329 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 KRT25Q7Z3Z0 450 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 CATIPQ7Z7H3 387 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 RASEFQ8IZ41 740 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 LNX1Q8TBB1 728 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 TCEAL4Q96EI5 215 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 KIF2CQ99661 725 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 GPR88Q9GZN0 384 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 ANO2Q9NQ90 1003 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 TBC1D22BQ9NU19 505 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 GON4LQ3T8J9 2241 aa10.81□□□□□ -0.68
CAPN3-216ENST00000567071 ANKRD17O75179 2603 aaKnown RBP10.81□□□□□ -0.68
CAPN3-216ENST00000567071 DPYSL4O14531 572 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PRRG1O14668 218 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 REC8O95072 547 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 FOSP01100 380 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 FTH1P19P0C7X4 201 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PRKCEQ02156 737 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 TRDNQ13061 729 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 SART3Q15020 963 aaKnown RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 TRIP6Q15654 476 aaKnown RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PRSS36Q5K4E3 855 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PKN3Q6P5Z2 889 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-216ENST00000567071 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 PLA2G4DQ86XP0 818 aa10.8□□□□□ -0.68
CAPN3-216ENST00000567071 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms