RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 IRS1P35568 1242 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 ENPEPQ07075 957 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 GRIK3Q13003 919 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 BTG3Q14201 252 aaPredicted RBP18.17■□□□□ 0.5
CLN6-208ENST00000567060 CTC1Q2NKJ3 1217 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 ZCWPW2Q504Y3 356 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 ALKAL1Q6UXT8 129 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 HFE2Q6ZVN8 426 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 ADHFE1Q8IWW8 467 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 FIBCD1Q8N539 461 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 XXYLT1Q8NBI6 393 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 HELQQ8TDG4 1101 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 SNX27Q96L92 541 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 NSUN3Q9H649 340 aaKnown RBP18.17■□□□□ 0.5
CLN6-208ENST00000567060 AAASQ9NRG9 546 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 SLC38A7Q9NVC3 462 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 DMAC2Q9NW81 257 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 HSPBP1Q9NZL4 362 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 CNTN3Q9P232 1028 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 DERAQ9Y315 318 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 HES2Q9Y543 173 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 RALGAPA2Q2PPJ7 1873 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 ZNF318Q5VUA4 2279 aa18.17■□□□□ 0.5
CLN6-208ENST00000567060 ZNF233A6NK53 670 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 XPOTO43592 962 aaKnown RBP18.16■□□□□ 0.5
CLN6-208ENST00000567060 LINC00271P0C7V0 271 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 HARSP12081 509 aaKnown RBP18.16■□□□□ 0.5
CLN6-208ENST00000567060 BMP6P22004 513 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 NLRP12P59046 1061 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 PPP2R3AQ06190 1150 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 DLX2Q07687 328 aaPredicted RBP18.16■□□□□ 0.5
CLN6-208ENST00000567060 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 SASS6Q6UVJ0 657 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 EP400NLQ6ZTU2 488 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 USP37Q86T82 979 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 CLP1Q92989 425 aaKnown RBP18.16■□□□□ 0.5
CLN6-208ENST00000567060 LPPQ93052 612 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 P2RX5Q93086 422 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 GAD1Q99259 594 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 APOL6Q9BWW8 343 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 KCNH6Q9H252 994 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 CLDND1Q9NY35 253 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 TMEM63CQ9P1W3 806 aa18.16■□□□□ 0.5
CLN6-208ENST00000567060 TTC26A0AVF1 554 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 PPP1R3GB7ZBB8 358 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 TISP43B9A030 160 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 BIN1O00499 593 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 NR3C1P04150 777 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 THP07101 528 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 LAG3P18627 525 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 AKAP5P24588 427 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 ERCC5P28715 1186 aaPredicted RBP18.15■□□□□ 0.5
CLN6-208ENST00000567060 MLH1P40692 756 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 FKBP3Q00688 224 aaKnown RBP18.15■□□□□ 0.5
CLN6-208ENST00000567060 PAK1Q13153 545 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 SLC10A6Q3KNW5 377 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 CAVIN1Q6NZI2 390 aaKnown RBP18.15■□□□□ 0.5
CLN6-208ENST00000567060 BRSK2Q8IWQ3 736 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 SMYD4Q8IYR2 804 aaPredicted RBP18.15■□□□□ 0.5
CLN6-208ENST00000567060 CEP120Q8N960 986 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 TMEM175Q9BSA9 504 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 MKNK1Q9BUB5 465 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 PLVAPQ9BX97 442 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 TBC1D13Q9NVG8 400 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 ANO10Q9NW15 660 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 MAPK8IP1Q9UQF2 711 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 FRMD4BQ9Y2L6 1034 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 C2CD2Q9Y426 696 aa18.15■□□□□ 0.5
CLN6-208ENST00000567060 TDRD15B5MCY1 1934 aaKnown RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 MEIS3P2A8K0S8 358 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 GRM6O15303 877 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 EXOC3O60645 756 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 FGFR1OPO95684 399 aaKnown RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 RB1P06400 928 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 RNASELQ05823 741 aaKnown RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 ENOX2Q16206 610 aaKnown RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 CRELD2Q6UXH1 353 aaPredicted RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 GSTCDQ8NEC7 633 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 FAM193BQ96PV7 902 aaPredicted RBP18.14■□□□□ 0.49
CLN6-208ENST00000567060 FAM213AQ9BRX8 229 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 RWDD2AQ9UIY3 292 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 FAM50BQ9Y247 325 aa18.14■□□□□ 0.49
CLN6-208ENST00000567060 C5orf67F2Z3F1 127 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 CETN3O15182 167 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 CLIC2O15247 247 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 CXCL8P10145 99 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 CYP3A5P20815 502 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
CLN6-208ENST00000567060 PAX3P23760 479 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 NR2F2P24468 414 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 PPM1AP35813 382 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 ACOT2P49753 483 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 OSTNP61366 133 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 DSC1Q08554 894 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 HYAL1Q12794 435 aa18.13■□□□□ 0.49
CLN6-208ENST00000567060 ADAM9Q13443 819 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms