RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 SORCS3Q9UPU3 1222 aa20.52■□□□□ 0.88
IFT140-208ENST00000566818 STX6O43752 255 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 MARCKSP29966 332 aaPredicted RBP20.51■□□□□ 0.87
IFT140-208ENST00000566818 LIG4P49917 911 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 ZNF131P52739 623 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 MCL1Q07820 350 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 KYAT1Q16773 422 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 UPP1Q16831 310 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 LIN9Q5TKA1 542 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 UBALD2Q8IYN6 164 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 KREMEN2Q8NCW0 462 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 SMG7Q92540 1137 aaKnown RBP20.51■□□□□ 0.87
IFT140-208ENST00000566818 FAM122AQ96E09 287 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 ZHX3Q9H4I2 956 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 GOLGA2P5Q9HBQ8 144 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 FBXO2Q9UK22 296 aaPredicted RBP20.51■□□□□ 0.87
IFT140-208ENST00000566818 MTMR6Q9Y217 621 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 SRPRBQ9Y5M8 271 aaKnown RBP20.51■□□□□ 0.87
IFT140-208ENST00000566818 CITO14578 2027 aa20.51■□□□□ 0.87
IFT140-208ENST00000566818 C2orf16Q68DN1 1984 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 PODXLO00592 558 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 HNRNPDLO14979 420 aaKnown RBP20.5■□□□□ 0.87
IFT140-208ENST00000566818 SPATA31D3P0C874 917 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 FGFR3P22607 806 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 PLA2G5P39877 138 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 CEBPZQ03701 1054 aaKnown RBP20.5■□□□□ 0.87
IFT140-208ENST00000566818 LILRA6Q6PI73 481 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 SPATA31D4Q6ZUB0 917 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 BMP8AQ7Z5Y6 402 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 LNX1Q8TBB1 728 aaPredicted RBP20.5■□□□□ 0.87
IFT140-208ENST00000566818 LRRC15Q8TF66 581 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 ZBTB45Q96K62 511 aaPredicted RBP20.5■□□□□ 0.87
IFT140-208ENST00000566818 PIDD1Q9HB75 910 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 FBXW11Q9UKB1 542 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.5■□□□□ 0.87
IFT140-208ENST00000566818 MORC2Q9Y6X9 1032 aaPredicted RBP20.5■□□□□ 0.87
IFT140-208ENST00000566818 CLUHO75153 1309 aa20.5■□□□□ 0.87
IFT140-208ENST00000566818 TECTAO75443 2155 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 TRIP11Q15643 1979 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 TRAK2O60296 914 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 RFPL2O75678 378 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 CLTAP09496 248 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 MYBP10242 640 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 DDIT3P35638 169 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 FAM173BQ6P4H8 233 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 HSCBQ8IWL3 235 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 SUGP1Q8IWZ8 645 aaKnown RBP20.49■□□□□ 0.87
IFT140-208ENST00000566818 KRI1Q8N9T8 703 aaKnown RBP20.49■□□□□ 0.87
IFT140-208ENST00000566818 SNX21Q969T3 373 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 PBXIP1Q96AQ6 731 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 CLSTN3Q9BQT9 956 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 KCNH6Q9H252 994 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 WDR6Q9NNW5 1121 aaKnown RBP20.49■□□□□ 0.87
IFT140-208ENST00000566818 TBX20Q9UMR3 447 aa20.49■□□□□ 0.87
IFT140-208ENST00000566818 ZMYND10O75800 440 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 PAPLNO95428 1278 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 PIGRP01833 764 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 RPL9P32969 192 aaKnown RBP20.48■□□□□ 0.87
IFT140-208ENST00000566818 SOX4Q06945 474 aaPredicted RBP20.48■□□□□ 0.87
IFT140-208ENST00000566818 SPECC1Q5M775 1068 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 RRAGBQ5VZM2 374 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 ANKS3Q6ZW76 656 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 FEZF2Q8TBJ5 459 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 ZMAT2Q96NC0 199 aaKnown RBP20.48■□□□□ 0.87
IFT140-208ENST00000566818 PRKD2Q9BZL6 878 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 PLEKHA5Q9HAU0 1116 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 MTRRQ9UBK8 725 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 NUB1Q9Y5A7 615 aa20.48■□□□□ 0.87
IFT140-208ENST00000566818 MTCL1Q9Y4B5 1905 aaKnown RBP20.48■□□□□ 0.87
IFT140-208ENST00000566818 VWA8A3KMH1 1905 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 HSP90AA1P07900 732 aaKnown RBP20.47■□□□□ 0.87
IFT140-208ENST00000566818 HNRNPA1P09651 372 aaKnown RBP eCLIP20.47■□□□□ 0.87
IFT140-208ENST00000566818 TKTP29401 623 aaKnown RBP20.47■□□□□ 0.87
IFT140-208ENST00000566818 PPP2R3AQ06190 1150 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 SEZ6Q53EL9 994 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 USP49Q70CQ1 688 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 C3orf58Q8NDZ4 430 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 ZNF707Q96C28 371 aaPredicted RBP20.47■□□□□ 0.87
IFT140-208ENST00000566818 USP28Q96RU2 1077 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 LIMD1Q9UGP4 676 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 BACE2Q9Y5Z0 518 aa20.47■□□□□ 0.87
IFT140-208ENST00000566818 TRIOO75962 3097 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 PDCD11Q14690 1871 aaKnown RBP20.46■□□□□ 0.87
IFT140-208ENST00000566818 XPOTO43592 962 aaKnown RBP20.46■□□□□ 0.87
IFT140-208ENST00000566818 ASGR2P07307 311 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 CXCL8P10145 99 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 GBP2P32456 591 aaPredicted RBP20.46■□□□□ 0.87
IFT140-208ENST00000566818 BRCC3P46736 316 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 SLC39A14Q15043 492 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 SLC10A6Q3KNW5 377 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 PPM1LQ5SGD2 360 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 CCDC73Q6ZRK6 1079 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 SV2BQ7L1I2 683 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 MAP4K3Q8IVH8 894 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 C18orf25Q96B23 403 aaPredicted RBP20.46■□□□□ 0.87
IFT140-208ENST00000566818 ASIC4Q96FT7 647 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 CLIC6Q96NY7 704 aa20.46■□□□□ 0.87
IFT140-208ENST00000566818 I3L4J1 428 aa20.45■□□□□ 0.86
IFT140-208ENST00000566818 SYN3O14994 580 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms