RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 HYIQ5T013 277 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 FAM171A1Q5VUB5 890 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 MPZL3Q6UWV2 235 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 SYT2Q8N9I0 419 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 RAD54LQ92698 747 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 EPSTI1Q96J88 318 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 ZBTB45Q96K62 511 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 AK8Q96MA6 479 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 CLIC6Q96NY7 704 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 ACO2Q99798 780 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 ARID3AQ99856 593 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 GPR62Q9BZJ7 368 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 POMKQ9H5K3 350 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 ARHGAP28Q9P2N2 729 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 TNFSF13BQ9Y275 285 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 TECTAO75443 2155 aa11.08□□□□□ -0.64
GTF3C1-206ENST00000566779 DOCK8Q8NF50 2099 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 ZMYM2Q9UBW7 1377 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 PI4K2BG5E9Z4 385 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 I3L4J1 428 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 HNRNPDLO14979 420 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 TRAK2O60296 914 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 MTHFRP42898 656 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 LIG4P49917 911 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 CLCN4P51793 760 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 KCNC3Q14003 757 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 USP41Q3LFD5 358 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 USP49Q70CQ1 688 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 DYMQ7RTS9 669 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 TDRD5Q8NAT2 981 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 LRRC15Q8TF66 581 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 SLC22A17Q8WUG5 538 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 SUSD6Q92537 303 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 LARP4BQ92615 738 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 PANK2Q9BZ23 570 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 S1PR5Q9H228 398 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 ADAM7Q9H2U9 754 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 TOPORSQ9NS56 1045 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 LARSQ9P2J5 1176 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 CCDC39Q9UFE4 941 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 MTMR6Q9Y217 621 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 SSX2IPQ9Y2D8 614 aa11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 RBM19Q9Y4C8 960 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-206ENST00000566779 B3GAT3O94766 335 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 MAPTP10636 758 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 MCF2P10911 925 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 GRM5P41594 1212 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 STAT6P42226 847 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 CLCNKBP51801 687 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 ITIH3Q06033 890 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 SPAG1Q07617 926 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 PTPAQ15257 358 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 PSMD5Q16401 504 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 RTP2Q5QGT7 225 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 ATAT1Q5SQI0 421 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 ELMSAN1Q6PJG2 1045 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 TMEM184AQ6ZMB5 413 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 HAUS6Q7Z4H7 955 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 PDILTQ8N807 584 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 TMEM161BQ8NDZ6 487 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 NOC3LQ8WTT2 800 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 INTS4Q96HW7 963 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 NECTIN4Q96NY8 510 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 ACAP3Q96P50 834 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 USP28Q96RU2 1077 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 TMEM134Q9H6X4 195 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 C17orf75Q9HAS0 396 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 PIDD1Q9HB75 910 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 C11orf16Q9NQ32 467 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 BLOC1S4Q9NUP1 217 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 KCND2Q9NZV8 630 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 TBC1D7Q9P0N9 293 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 FBXO2Q9UK22 296 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 HCN4Q9Y3Q4 1203 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 NR2E1Q9Y466 385 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 IRAK3Q9Y616 596 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 KMT2EQ8IZD2 1858 aa11.06□□□□□ -0.64
GTF3C1-206ENST00000566779 SMIM28A0A1B0GU29 152 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 C2CD4DB7Z1M9 353 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 LOC730098B7Z3J9 87 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 C3orf80F5H4A9 247 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 H0YCG3 227 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 RFPL2O75678 378 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 CXCL8P10145 99 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 IDEP14735 1019 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 CD46P15529 392 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 NMT1P30419 496 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 BRCC3P46736 316 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 DSG1Q02413 1049 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 SOX4Q06945 474 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 ARSHQ5FYA8 562 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 KIAA0319Q5VV43 1072 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms