RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SPIRE2Q8WWL2 714 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 TCHPQ9BT92 498 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 CDT1Q9H211 546 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 UPF2Q9HAU5 1272 aaKnown RBP30.34■■■□□ 2.45
UBFD1-206ENST00000566669 H0YCG3 227 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 KCNE1P15382 129 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 NPR3P17342 541 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 RFX1P22670 979 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 RPL9P32969 192 aaKnown RBP30.33■■■□□ 2.45
UBFD1-206ENST00000566669 CLCNKBP51801 687 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 GLRA4Q5JXX5 417 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 MPZL3Q6UWV2 235 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 CCDC105Q8IYK2 499 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 DAW1Q8N136 415 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 ACAP3Q96P50 834 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 SLC2A4RGQ9NR83 387 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 FAM86C1Q9NVL1 165 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 CDH7Q9ULB5 785 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 KCNH3Q9ULD8 1083 aa30.33■■■□□ 2.45
UBFD1-206ENST00000566669 ZFHX2Q9C0A1 2572 aaPredicted RBP30.33■■■□□ 2.45
UBFD1-206ENST00000566669 OR1D2P34982 312 aa30.32■■■□□ 2.44
UBFD1-206ENST00000566669 HTR4Q13639 388 aa30.32■■■□□ 2.44
UBFD1-206ENST00000566669 AXDND1Q5T1B0 1012 aaPredicted RBP30.32■■■□□ 2.44
UBFD1-206ENST00000566669 CDK5RAP3Q96JB5 506 aa30.32■■■□□ 2.44
UBFD1-206ENST00000566669 RUSC1Q9BVN2 902 aa30.32■■■□□ 2.44
UBFD1-206ENST00000566669 POLD4Q9HCU8 107 aa30.32■■■□□ 2.44
UBFD1-206ENST00000566669 H3BQV1 296 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 TOM1L1O75674 476 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 PROZP22891 400 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 PHLDB3Q6NSJ2 640 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 GRASPQ7Z6J2 395 aaPredicted RBP30.31■■■□□ 2.44
UBFD1-206ENST00000566669 SLC7A14Q8TBB6 771 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 RSAD2Q8WXG1 361 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 MMTAG2Q9BU76 263 aaKnown RBP30.31■■■□□ 2.44
UBFD1-206ENST00000566669 CXCL16Q9H2A7 254 aa30.31■■■□□ 2.44
UBFD1-206ENST00000566669 PP2D1A8MPX8 630 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 STK25O00506 426 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 SYN3O14994 580 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 NARSO43776 548 aaKnown RBP30.3■■■□□ 2.44
UBFD1-206ENST00000566669 CFHP08603 1231 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 PLS3P13797 630 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 MAPK7Q13164 816 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 IL17AQ16552 155 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 SYT2Q8N9I0 419 aaPredicted RBP30.3■■■□□ 2.44
UBFD1-206ENST00000566669 SHDQ96IW2 340 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 SNX27Q96L92 541 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 AK8Q96MA6 479 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 TARS2Q9BW92 718 aaKnown RBP30.3■■■□□ 2.44
UBFD1-206ENST00000566669 CNTN3Q9P232 1028 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 CDY1Q9Y6F8 540 aa30.3■■■□□ 2.44
UBFD1-206ENST00000566669 ZPBP2Q6X784 338 aa30.29■■■□□ 2.44
UBFD1-206ENST00000566669 LARSQ9P2J5 1176 aaKnown RBP30.29■■■□□ 2.44
UBFD1-206ENST00000566669 H7C4K7 107 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 CDC25AP30304 524 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 SLC8B1Q6J4K2 584 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 TAS1R3Q7RTX0 852 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 DTWD2Q8NBA8 298 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 ZNF461Q8TAF7 563 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 MAFFQ9ULX9 164 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 POLIQ9UNA4 740 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 NUMBLQ9Y6R0 609 aa30.28■■■□□ 2.44
UBFD1-206ENST00000566669 USP34Q70CQ2 3546 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 DOCK8Q8NF50 2099 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 PODXLO00592 558 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 SLC16A4O15374 487 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 ADAM12O43184 909 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 BMP15O95972 392 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 TKTP29401 623 aaKnown RBP30.27■■■□□ 2.44
UBFD1-206ENST00000566669 NOLC1Q14978 699 aaKnown RBP eCLIP30.27■■■□□ 2.44
UBFD1-206ENST00000566669 KYAT1Q16773 422 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 CEP120Q8N960 986 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 KCNN1Q92952 543 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 TMX3Q96JJ7 454 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 ARHGEF3Q9NR81 526 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 NUB1Q9Y5A7 615 aa30.27■■■□□ 2.44
UBFD1-206ENST00000566669 KRBA1A5PL33 1030 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 CCL16O15467 120 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 ELF1P32519 619 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 ABCD1P33897 745 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 OSTNP61366 133 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 ZRSR1Q15695 479 aaKnown RBP30.26■■■□□ 2.43
UBFD1-206ENST00000566669 PABPC1LQ4VXU2 614 aaKnown RBP30.26■■■□□ 2.43
UBFD1-206ENST00000566669 CD300LGQ6UXG3 332 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 KCNK18Q7Z418 384 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 TMEM161BQ8NDZ6 487 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 GPR152Q8TDT2 470 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 FGF13Q92913 245 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 PLEKHA5Q9HAU0 1116 aa30.26■■■□□ 2.43
UBFD1-206ENST00000566669 AVENQ9NQS1 362 aaPredicted RBP30.26■■■□□ 2.43
UBFD1-206ENST00000566669 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.26■■■□□ 2.43
UBFD1-206ENST00000566669 VWA3AA6NCI4 1184 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 ABLIM1O14639 778 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 CLDN3O15551 220 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 PI15O43692 258 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 PFKPQ01813 784 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 TBC1D17Q9HA65 648 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 GOLGA2P5Q9HBQ8 144 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 ODF2LQ9ULJ1 636 aa30.25■■■□□ 2.43
UBFD1-206ENST00000566669 MAPTP10636 758 aaKnown RBP30.24■■■□□ 2.43
UBFD1-206ENST00000566669 GJB2P29033 226 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms