RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 CD300LGQ6UXG3 332 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 MAEAQ7L5Y9 396 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 NOSTRINQ8IVI9 506 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 CCDC83Q8IWF9 413 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 ATRIPQ8WXE1 791 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 ING5Q8WYH8 240 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 PRIMPOLQ96LW4 560 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 CNTNAP3BQ96NU0 1288 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 CNTNAP3Q9BZ76 1288 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 TTC12Q9H892 705 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-214ENST00000566230 PRMT7Q9NVM4 692 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-214ENST00000566230 KCNH3Q9ULD8 1083 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 RECQL4O94761 1208 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 EDN1P05305 212 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 SPATA31C1P0DKV0 1188 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 XRCC6P12956 609 aaKnown RBP eCLIP14.77□□□□□ -0.05
COMMD4-214ENST00000566230 TGM1P22735 817 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 MAGEA9P43362 315 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 ATXN1P54253 815 aaKnown RBP14.77□□□□□ -0.05
COMMD4-214ENST00000566230 ELAVL2Q12926 359 aaKnown RBP14.77□□□□□ -0.05
COMMD4-214ENST00000566230 TRIM29Q14134 588 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 SLC5A9Q2M3M2 681 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 PABPC1LQ4VXU2 614 aaKnown RBP14.77□□□□□ -0.05
COMMD4-214ENST00000566230 PDXDC1Q6P996 788 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 TSSK4Q6SA08 328 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-214ENST00000566230 TPRG1Q6ZUI0 275 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 BSNDQ8WZ55 320 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 MCRS1Q96EZ8 462 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 EPC1Q9H2F5 836 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 ZSCAN32Q9NX65 697 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 MTRRQ9UBK8 725 aa14.77□□□□□ -0.05
COMMD4-214ENST00000566230 N4BP3O15049 544 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 JAK2O60674 1132 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 ECI2O75521 394 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 KRT37O76014 449 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 TXKP42681 527 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 RPS9P46781 194 aaKnown RBP14.76□□□□□ -0.05
COMMD4-214ENST00000566230 ST3GAL1Q11201 340 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 CALCRLQ16602 461 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 EEF1DP3Q658K8 133 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 ZNF687Q8N1G0 1237 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 CCDC43Q96MW1 224 aaKnown RBP14.76□□□□□ -0.05
COMMD4-214ENST00000566230 MTMR9Q96QG7 549 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 NELL2Q99435 816 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 SMG5Q9UPR3 1016 aaKnown RBP14.76□□□□□ -0.05
COMMD4-214ENST00000566230 MRPS23Q9Y3D9 190 aaKnown RBP14.76□□□□□ -0.05
COMMD4-214ENST00000566230 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
COMMD4-214ENST00000566230 TMEM189-UBE2V1I3L0A0 370 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 RHOP08100 348 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 TKTP29401 623 aaKnown RBP14.75□□□□□ -0.05
COMMD4-214ENST00000566230 KRT2P35908 639 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 PRPF4BQ13523 1007 aaKnown RBP14.75□□□□□ -0.05
COMMD4-214ENST00000566230 TANGO2Q6ICL3 276 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 RTL10Q7L3V2 364 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 ZBTB8OSQ8IWT0 167 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 GPR161Q8N6U8 529 aaKnown RBP14.75□□□□□ -0.05
COMMD4-214ENST00000566230 FAM184AQ8NB25 1140 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 TMX3Q96JJ7 454 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 CCDC113Q9H0I3 377 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 AVENQ9NQS1 362 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-214ENST00000566230 PRMT8Q9NR22 394 aaPredicted RBP14.75□□□□□ -0.05
COMMD4-214ENST00000566230 HEBP1Q9NRV9 189 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 GDAQ9Y2T3 454 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 KIF3AQ9Y496 699 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 BACE2Q9Y5Z0 518 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 RALGAPA1Q6GYQ0 2036 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 COL4A2P08572 1712 aa14.75□□□□□ -0.05
COMMD4-214ENST00000566230 TICRRQ7Z2Z1 1910 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 I3L4J1 428 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 ACKR2O00590 384 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 NRG2O14511 850 aaPredicted RBP14.74□□□□□ -0.05
COMMD4-214ENST00000566230 PRKCBP05771 671 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 TDGF1P13385 188 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 CEBPBP17676 345 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 ATP2B1P20020 1258 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 FCARP24071 287 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 CLCNKBP51801 687 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 MTAPQ13126 283 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 SAFBQ15424 915 aaKnown RBP eCLIP14.74□□□□□ -0.05
COMMD4-214ENST00000566230 ZNF852Q6ZMS4 543 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 CATSPER3Q86XQ3 398 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 C3orf58Q8NDZ4 430 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 MCPH1Q8NEM0 835 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 DDX27Q96GQ7 796 aaKnown RBP14.74□□□□□ -0.05
COMMD4-214ENST00000566230 PPP1R10Q96QC0 940 aaKnown RBP14.74□□□□□ -0.05
COMMD4-214ENST00000566230 TMEM60Q9H2L4 133 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 PARD6AQ9NPB6 346 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 GDE1Q9NZC3 331 aa14.74□□□□□ -0.05
COMMD4-214ENST00000566230 CNOT1A5YKK6 2376 aaKnown RBP14.74□□□□□ -0.05
COMMD4-214ENST00000566230 CHD6Q8TD26 2715 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 USP24Q9UPU5 2620 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 ARHGEF37A1IGU5 675 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 NCAM2O15394 837 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 TBC1D4O60343 1298 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 MED24O75448 989 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 B3GAT3O94766 335 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 LIG1P18858 919 aa14.73□□□□□ -0.05
COMMD4-214ENST00000566230 SDHBP21912 280 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms