RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
SF3B3-207ENST00000566095 OFD1O75665 1012 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 ADRB2P07550 413 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 ACTN1P12814 892 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 FGFR4P22455 802 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 CD52P31358 61 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 KRT9P35527 623 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 PIK3CAP42336 1068 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 OSTNP61366 133 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 YWHAEP62258 255 aaKnown RBP10.61□□□□□ -0.71
SF3B3-207ENST00000566095 CLDN10P78369 228 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM132DQ14C87 1099 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 SYCP1Q15431 976 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 EEF1DP3Q658K8 133 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 SLC24A5Q71RS6 500 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 TTC39CQ8N584 583 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 FAM124BQ9H5Z6 455 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-207ENST00000566095 CDHR5Q9HBB8 845 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 KANSL3Q9P2N6 904 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 MYO1AQ9UBC5 1043 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 PARP2Q9UGN5 583 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 ITGA11Q9UKX5 1188 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 UBQLN1Q9UMX0 589 aaKnown RBP10.61□□□□□ -0.71
SF3B3-207ENST00000566095 COQ4Q9Y3A0 265 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 PCDHB2Q9Y5E7 798 aa10.61□□□□□ -0.71
SF3B3-207ENST00000566095 TTC26A0AVF1 554 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ARHGEF37A1IGU5 675 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 LRRIQ3A6PVS8 624 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 FAM189A1O60320 539 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 TRIM49P0CI25 452 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 TRIM49CP0CI26 452 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 CXCL8P10145 99 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 RAG1P15918 1043 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 TBXAS1P24557 533 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ATICP31939 592 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 CASP14P31944 242 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 PNPLA4P41247 253 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 GCLMP48507 274 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 MFAP3P55082 362 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 KRT83P78385 493 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 TFAMQ00059 246 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 FAAP100Q0VG06 881 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 MYO1EQ12965 1108 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ENOX2Q16206 610 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ABI1Q8IZP0 508 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 URGCPQ8TCY9 931 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 DIS3LQ8TF46 1054 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 WNT8BQ93098 351 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 JAKMIP2Q96AA8 810 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 KIF12Q96FN5 646 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 SNX27Q96L92 541 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ZNF560Q96MR9 790 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 NT5C1BQ96P26 610 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 SPAG5Q96R06 1193 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ADAM2Q99965 735 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 LSM14BQ9BX40 385 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 IKZF4Q9H2S9 585 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 ELAC1Q9H777 363 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 LUC7LQ9NQ29 371 aaKnown RBP10.6□□□□□ -0.71
SF3B3-207ENST00000566095 RGS18Q9NS28 235 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 RAB20Q9NX57 234 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 AIPL1Q9NZN9 384 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 CNTN3Q9P232 1028 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 LRFN2Q9ULH4 789 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 IPPQ9Y573 584 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 PAXBP1Q9Y5B6 917 aa10.6□□□□□ -0.71
SF3B3-207ENST00000566095 KIAA0355O15063 1070 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 LCA5LO95447 670 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 TIMP1P01033 207 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 EDN1P05305 212 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 CCDC175P0C221 793 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 KCNE1P15382 129 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 CYP3A5P20815 502 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 CYLC1P35663 651 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 FXR1P51114 621 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 RBP5P82980 135 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 MAPK8IP2Q13387 824 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 PPIGQ13427 754 aaKnown RBP eCLIP10.59□□□□□ -0.717e-10■□□□□ 8.5
SF3B3-207ENST00000566095 IKBKEQ14164 716 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 SGSM1Q2NKQ1 1148 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 ZACNQ401N2 412 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 PLEKHG4Q58EX7 1191 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 C10orf76Q5T2E6 689 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 CNKSR3Q6P9H4 555 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 GLB1LQ6UWU2 654 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 NYAP1Q6ZVC0 841 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 MRPL10Q7Z7H8 261 aaKnown RBP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 EHBP1Q8NDI1 1231 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 TMEM117Q9H0C3 514 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 INTS2Q9H0H0 1204 aaKnown RBP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 MTIF3Q9H2K0 278 aaKnown RBP10.59□□□□□ -0.71
SF3B3-207ENST00000566095 RSAD1Q9HA92 442 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 SNTG2Q9NY99 539 aa10.59□□□□□ -0.71
SF3B3-207ENST00000566095 APEX2Q9UBZ4 518 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms