RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 EXTL3O43909 919 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 STBD1O95210 358 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 AKAP5P24588 427 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 CIITAP33076 1130 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 VIPR2P41587 438 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 PXNP49023 591 aaPredicted RBP10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 C19orf57Q0VDD7 668 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 COL28A1Q2UY09 1125 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 UAP1L1Q3KQV9 507 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 PRSS36Q5K4E3 855 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 IQCEQ6IPM2 695 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 ELMOD1Q8N336 334 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 GSTCDQ8NEC7 633 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 DEFB124Q8NES8 71 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 TCP11Q8WWU5 503 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 RUFY2Q8WXA3 655 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 DUSP15Q9H1R2 295 aaPredicted RBP10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 UNC45AQ9H3U1 944 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 KLK13Q9UKR3 277 aa10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 SMG1Q96Q15 3661 aaKnown RBP10.06□□□□□ -0.8
VPS9D1-205ENST00000565452 MTCL1Q9Y4B5 1905 aaKnown RBP10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 LNP1A1A4G5 178 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 ARHGEF37A1IGU5 675 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 TMEM150BA6NC51 233 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 SLC38A8A6NNN8 435 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 HEPACAM2A8MVW5 462 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 SPECC1L-ADORA2AF8WAN1 911 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 MSH4O15457 936 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 TUSC3Q13454 348 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 CCINQ13939 588 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 PTPAQ15257 358 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 LRCH2Q5VUJ6 765 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 ANKS3Q6ZW76 656 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 HAUS6Q7Z4H7 955 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 ZNF461Q8TAF7 563 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 HASPINQ8TF76 798 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 TCEAL4Q96EI5 215 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 ZNF512Q96ME7 567 aaPredicted RBP10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 ZSWIM3Q96MP5 696 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 PAAF1Q9BRP4 392 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 KLK14Q9P0G3 267 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 BACE2Q9Y5Z0 518 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
VPS9D1-205ENST00000565452 DOCK6Q96HP0 2047 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 ARNTLO00327 626 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 SH2B2O14492 632 aaPredicted RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 TRAPPC3O43617 180 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 TSPAN1O60635 241 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 DKC1O60832 514 aaKnown RBP eCLIP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 EIF5BO60841 1220 aaKnown RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 CAPNS1P04632 268 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 THP07101 528 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 HOXC13P31276 330 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 SOX9P48436 509 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 USP11P51784 963 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 PSMC5P62195 406 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 SIM1P81133 766 aaPredicted RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 PTH1RQ03431 593 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 KARSQ15046 597 aaKnown RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 PON2Q15165 354 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 ANO5Q75V66 913 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 RAB11FIP4Q86YS3 637 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 LEMD2Q8NC56 503 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 ZSCAN18Q8TBC5 510 aaPredicted RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 HNRNPLLQ8WVV9 542 aaKnown RBP10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 SLC5A5Q92911 643 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 TMEM143Q96AN5 459 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 GTF3C3Q9Y5Q9 886 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 TAF6LQ9Y6J9 622 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 LAMA5O15230 3695 aa10.04□□□□□ -0.8
VPS9D1-205ENST00000565452 ITPR1Q14643 2758 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 AKAP13Q12802 2813 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 CASTOR2A6NHX0 329 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 DPYSL4O14531 572 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 ABLIM3O94929 683 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 KIF4AO95239 1232 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 GSPT1P15170 499 aaKnown RBP10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 FGFR3P22607 806 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 GNA11P29992 359 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 CTHP32929 405 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 RFC5P40937 340 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 FCHO2Q0JRZ9 810 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 LMAN2Q12907 356 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 MXD4Q14582 209 aaPredicted RBP10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 TXNDC11Q6PKC3 985 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 C11orf74Q86VG3 221 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 TCEAL8Q8IYN2 117 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 REXO1Q8N1G1 1221 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms