RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 HIP1RO75146 1068 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 KCNJ1P48048 391 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MTMR1Q13613 665 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 SPATA1Q5VX52 437 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 DENND2CQ68D51 928 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 SND1Q7KZF4 910 aaKnown RBP eCLIP3.57□□□□□ -1.84
CHD9-213ENST00000564845 CBWD2Q8IUF1 395 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 THNSL1Q8IYQ7 743 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MLKLQ8NB16 471 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 P2RX5Q93086 422 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 NDST4Q9H3R1 872 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 IL1RAPL1Q9NZN1 696 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 STK17AQ9UEE5 414 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 AFG3L2Q9Y4W6 797 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 LRRIQ4A6NIV6 560 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TADA3O75528 432 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TMCC1O94876 653 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 PDE1CQ14123 709 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 TBCCQ15814 346 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 PDCD2Q16342 344 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 DGKHQ86XP1 1220 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 LRRC37BQ96QE4 947 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MTMR9Q96QG7 549 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 LRRC1Q9BTT6 524 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 HAPLN2Q9GZV7 340 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 RIOX1Q9H6W3 641 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 GOLGA2P5Q9HBQ8 144 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 UBE2TQ9NPD8 197 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 ADGRG1Q9Y653 693 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CLUHO75153 1309 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 C10orf71Q711Q0 1435 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TBC1D8O95759 1140 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 WEE2P0C1S8 567 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CYTH1Q15438 398 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TTI2Q6NXR4 508 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 SARM1Q6SZW1 724 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 U2AF1L4Q8WU68 220 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 CDKL2Q92772 493 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 FRMD8P1Q9BZ68 369 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 PDE11AQ9HCR9 933 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 ABCB6Q9NP58 842 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MED4Q9NPJ6 270 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TMPRSS4Q9NRS4 437 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 H3BQF6 201 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 NDUFA10O95299 355 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CCNE2O96020 404 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 KRT19P08727 400 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 VSNL1P62760 191 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 SMTNL2Q2TAL5 461 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 RNF169Q8NCN4 708 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 NCLNQ969V3 563 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MAML3Q96JK9 1138 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 C12orf65Q9H3J6 166 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 TUFT1Q9NNX1 390 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TIMM13Q9Y5L4 95 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 KAT6AQ92794 2004 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 IQCF3P0C7M6 154 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 GIT2Q14161 759 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 SBK1Q52WX2 424 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 KRT25Q7Z3Z0 450 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 NANOGNBQ7Z5D8 188 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 RHPN2Q8IUC4 686 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CCDC60Q8IWA6 550 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 ADSSL1Q8N142 457 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 RNF10Q8N5U6 811 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 DNAJC19Q96DA6 116 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 FAM167AQ96KS9 214 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 GOLGA8SH3BPF8 625 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TLR2O60603 784 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MFAP3LO75121 409 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 ITGA4P13612 1032 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 DYNLT1P63172 113 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MFSD4BQ5TF39 518 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 C9orf131Q5VYM1 1079 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 OTOP1Q7RTM1 612 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 NEK9Q8TD19 979 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 PLEKHO2Q8TD55 490 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 ATG4AQ8WYN0 398 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 MKL1Q969V6 931 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 EMID1Q96A84 441 aaPredicted RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 SYT17Q9BSW7 474 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 SYNCQ9H7C4 482 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 VPS18Q9P253 973 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CPA4Q9UI42 421 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 I3L4J1 428 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 GLP2RO95838 553 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 GMPRP36959 345 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 BEX3Q00994 111 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 PTK2Q05397 1052 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 ARL6IP4Q66PJ3 421 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 GALNT18Q6P9A2 607 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 PCGF5Q86SE9 256 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TMEM237Q96Q45 408 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 CEP41Q9BYV8 373 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 RPRD1BQ9NQG5 326 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 STRIP2Q9ULQ0 834 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 TPX2Q9ULW0 747 aaKnown RBP3.57□□□□□ -1.84
CHD9-213ENST00000564845 GAKO14976 1311 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 A0A1W2PQ27 194 aa3.57□□□□□ -1.84
CHD9-213ENST00000564845 A0A1W2PQ64 194 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms