RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CHRNA3P32297 505 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 VHLP40337 213 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 MARSP56192 900 aaKnown RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 TMED2Q15363 201 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 ABCB5Q2M3G0 1257 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 GALNT17Q6IS24 598 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 MTDHQ86UE4 582 aaKnown RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 PRR11Q96HE9 360 aaPredicted RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 GBP5Q96PP8 586 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 CADM1Q9BY67 442 aaKnown RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 CTTNBP2NLQ9P2B4 639 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 LRCH1Q9Y2L9 728 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 RSPH10B2B2RC85 870 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 RSPH10BP0C881 870 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 COILP38432 576 aaPredicted RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 STAT1P42224 750 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 DRAP1Q14919 205 aaPredicted RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 C4orf50Q6ZRC1 276 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 ZNF513Q8N8E2 541 aaPredicted RBP17.34■□□□□ 0.37
LINC00554-201ENST00000564841 SLC20A1Q8WUM9 679 aa17.34■□□□□ 0.37
LINC00554-201ENST00000564841 PLA2G4BP0C869 781 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 INHBCP55103 352 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 TMEM62Q0P6H9 643 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 DLGAP5Q15398 846 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 CNPY1Q3B7I2 92 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 ASPRV1Q53RT3 343 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 CAPN12Q6ZSI9 719 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 SERPINB12Q96P63 405 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 DCLRE1BQ9H816 532 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 ASIC3Q9UHC3 531 aa17.33■□□□□ 0.37
LINC00554-201ENST00000564841 WDR91A4D1P6 747 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 E7ENQ6 273 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 ABLIM1O14639 778 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 PIAS1O75925 651 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 ECE1P42892 770 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 FXR2P51116 673 aaKnown RBP eCLIP17.33■□□□□ 0.36
LINC00554-201ENST00000564841 NPEPPSP55786 919 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 OVGP1Q12889 678 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 CALCOCO2Q13137 446 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
LINC00554-201ENST00000564841 EPM2AIP1Q7L775 607 aaPredicted RBP17.33■□□□□ 0.36
LINC00554-201ENST00000564841 C4orf33Q8N1A6 199 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 ROPN1BQ9BZX4 212 aaPredicted RBP17.33■□□□□ 0.36
LINC00554-201ENST00000564841 C12orf65Q9H3J6 166 aaKnown RBP17.33■□□□□ 0.36
LINC00554-201ENST00000564841 ROPN1Q9HAT0 212 aaPredicted RBP17.33■□□□□ 0.36
LINC00554-201ENST00000564841 UBN1Q9NPG3 1134 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 PCYOX1Q9UHG3 505 aa17.33■□□□□ 0.36
LINC00554-201ENST00000564841 RASA4BC9J798 803 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 MAPK13O15264 365 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 RASA4O43374 803 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 THAP12O43422 761 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 COMTP21964 271 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 PLEKHG4Q58EX7 1191 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 ARSHQ5FYA8 562 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 SLC35C1Q96A29 364 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 DYDC2Q96IM9 177 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 RIOX1Q9H6W3 641 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 PSTPIP2Q9H939 334 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC00554-201ENST00000564841 BMP2KQ9NSY1 1161 aaPredicted RBP17.32■□□□□ 0.36
LINC00554-201ENST00000564841 STOML1Q9UBI4 398 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 F5H6K3 240 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 PODXLO00592 558 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 MED24O75448 989 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 TMEM253P0C7T8 217 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 MARK3P27448 753 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 YARSP54577 528 aaKnown RBP17.32■□□□□ 0.36
LINC00554-201ENST00000564841 MOGSQ13724 837 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 ZNF568Q3ZCX4 644 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 PRR16Q569H4 304 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 ARHGEF18Q6ZSZ5 1173 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 CYP2W1Q8TAV3 490 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 ACP6Q9NPH0 428 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 DNAAF2Q9NVR5 837 aaKnown RBP17.32■□□□□ 0.36
LINC00554-201ENST00000564841 GALNT8Q9NY28 637 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
LINC00554-201ENST00000564841 A0A1W2PRG0 241 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 ZBTB39O15060 712 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CYP11B2P19099 503 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CTNNA2P26232 953 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 PDIA5Q14554 519 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 MYBPC3Q14896 1274 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CYP4F22Q6NT55 531 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 LRRC74BQ6ZQY2 392 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CCDC65Q8IXS2 484 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 GATA6Q92908 595 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 NPHS2Q9NP85 383 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 RHBDL2Q9NX52 303 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 DNAJC12Q9UKB3 198 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
LINC00554-201ENST00000564841 UBXN2AP68543 259 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 KRT17Q04695 432 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 ACVR2BQ13705 512 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 QRICH1Q2TAL8 776 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 WASHC2DQ5SRD0 308 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms