RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 XPOTO43592 962 aaKnown RBP14.61□□□□□ -0.07
CLK3-216ENST00000564468 DCXO43602 365 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 TRAPPC3O43617 180 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 GCNT3O95395 438 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 ADH1AP07327 375 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 KLRC2P26717 231 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 DSG1Q02413 1049 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 KCNC3Q14003 757 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 NAB2Q15742 525 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 CLUL1Q15846 466 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 GLRA4Q5JXX5 417 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 ADALQ6DHV7 355 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 ANKRD54Q6NXT1 300 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 LLGL2Q6P1M3 1020 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 PDXDC1Q6P996 788 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 DCLRE1AQ6PJP8 1040 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 CD302Q8IX05 232 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 CEP57L1Q8IYX8 460 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 SMRP1Q8NCR6 262 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 LEO1Q8WVC0 666 aaPredicted RBP14.61□□□□□ -0.07
CLK3-216ENST00000564468 AUTS2Q8WXX7 1259 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 ACCSQ96QU6 501 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 MSTO1Q9BUK6 570 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 TRIM9Q9C026 710 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 DZANK1Q9NVP4 752 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 CLEC1BQ9P126 229 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 KCNH3Q9ULD8 1083 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 BARX2Q9UMQ3 279 aaPredicted RBP14.61□□□□□ -0.07
CLK3-216ENST00000564468 HCFC2Q9Y5Z7 792 aa14.61□□□□□ -0.07
CLK3-216ENST00000564468 A0A0B4J269 797 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 LILRB3O75022 631 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 PPP1R37O75864 691 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 B3GAT3O94766 335 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 EFEMP2O95967 443 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 IL9P15248 144 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 CMA1P23946 247 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 RPL9P32969 192 aaKnown RBP14.6□□□□□ -0.07
CLK3-216ENST00000564468 MRE11P49959 708 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 PPP2R3AQ06190 1150 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
CLK3-216ENST00000564468 SLC10A6Q3KNW5 377 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 ZC2HC1CQ53FD0 456 aaPredicted RBP14.6□□□□□ -0.07
CLK3-216ENST00000564468 L1TD1Q5T7N2 865 aaKnown RBP14.6□□□□□ -0.07
CLK3-216ENST00000564468 KIAA0319Q5VV43 1072 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 CNNM4Q6P4Q7 775 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 KLHL5Q96PQ7 755 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
CLK3-216ENST00000564468 C7orf25Q9BPX7 421 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 GPR62Q9BZJ7 368 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 TMEM206Q9H813 350 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 RPF1Q9H9Y2 349 aaKnown RBP14.6□□□□□ -0.07
CLK3-216ENST00000564468 USP25Q9UHP3 1055 aa14.6□□□□□ -0.07
CLK3-216ENST00000564468 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 C2CD2LO14523 706 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 KIF4AO95239 1232 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 C1RP00736 705 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 CNPP09543 421 aaKnown RBP14.59□□□□□ -0.07
CLK3-216ENST00000564468 ASIC1P78348 528 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 POU5F1Q01860 360 aaKnown RBP14.59□□□□□ -0.07
CLK3-216ENST00000564468 ITIH3Q06033 890 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 UPP1Q16831 310 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 CES5AQ6NT32 575 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 TAS1R1Q7RTX1 841 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 VN1R2Q8NFZ6 395 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 RABGGTAQ92696 567 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 STAMQ92783 540 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 PAAF1Q9BRP4 392 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 TTPALQ9BTX7 342 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 STRA6Q9BX79 667 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 CXCL16Q9H2A7 254 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 RXFP1Q9HBX9 757 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 TBC1D7Q9P0N9 293 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 FNIP2Q9P278 1114 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 STYXL1Q9Y6J8 313 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 WDFY4Q6ZS81 3184 aa14.59□□□□□ -0.07
CLK3-216ENST00000564468 TTC26A0AVF1 554 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 F8W810 466 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 LDHAP00338 332 aaKnown RBP14.58□□□□□ -0.08
CLK3-216ENST00000564468 CXCL8P10145 99 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 CYP3A5P20815 502 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 CLCNKBP51801 687 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 SEZ6Q53EL9 994 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 FAM171A1Q5VUB5 890 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.58□□□□□ -0.08
CLK3-216ENST00000564468 UNC13DQ70J99 1090 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 CEP57Q86XR8 500 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 HASPINQ8TF76 798 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 SLC22A17Q8WUG5 538 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 RIN2Q8WYP3 895 aaPredicted RBP14.58□□□□□ -0.08
CLK3-216ENST00000564468 POMGNT1Q8WZA1 660 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 MFSD14AQ96MC6 490 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 ZMAT2Q96NC0 199 aaKnown RBP14.58□□□□□ -0.08
CLK3-216ENST00000564468 HAPLN2Q9GZV7 340 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 CACNG4Q9UBN1 327 aa14.58□□□□□ -0.08
CLK3-216ENST00000564468 AGO2Q9UKV8 859 aaKnown RBP14.58□□□□□ -0.08
CLK3-216ENST00000564468 UBQLN1Q9UMX0 589 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms