RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
CDH11-209ENST00000564317 INSL6Q9Y581 213 aa16.84■□□□□ 0.29
CDH11-209ENST00000564317 MRPL42Q9Y6G3 142 aaKnown RBP16.84■□□□□ 0.29
CDH11-209ENST00000564317 LRRIQ3A6PVS8 624 aaPredicted RBP16.83■□□□□ 0.28
CDH11-209ENST00000564317 LINC00271P0C7V0 271 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 DSC1Q08554 894 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.28
CDH11-209ENST00000564317 IQCB1Q15051 598 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 ZBTB6Q15916 424 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 TPD52L1Q16890 204 aaPredicted RBP16.83■□□□□ 0.28
CDH11-209ENST00000564317 PARD3BQ8TEW8 1205 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 CGRRF1Q99675 332 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 MRPL9Q9BYD2 267 aaKnown RBP16.83■□□□□ 0.28
CDH11-209ENST00000564317 PBX4Q9BYU1 374 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
CDH11-209ENST00000564317 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 TSPY26PQ9H489 355 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 CWH43Q9H720 699 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 CBX8Q9HC52 389 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 SAMSN1Q9NSI8 373 aaKnown RBP16.83■□□□□ 0.28
CDH11-209ENST00000564317 PCDHA11Q9Y5I1 949 aa16.83■□□□□ 0.28
CDH11-209ENST00000564317 CITO14578 2027 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 THP07101 528 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
CDH11-209ENST00000564317 VAMP7P51809 220 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 MCCD1P59942 119 aaPredicted RBP16.82■□□□□ 0.28
CDH11-209ENST00000564317 BFSP1Q12934 665 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 TMEM132DQ14C87 1099 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 CCDC40Q4G0X9 1142 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 HSP90AA4PQ58FG1 418 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 SCARA3Q6AZY7 606 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 INTS8Q75QN2 995 aaKnown RBP16.82■□□□□ 0.28
CDH11-209ENST00000564317 SPRED2Q7Z698 418 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 OR5B17Q8NGF7 314 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 TMC2Q8TDI7 906 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 ZNF516Q92618 1163 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 CNOT6LQ96LI5 555 aaKnown RBP16.82■□□□□ 0.28
CDH11-209ENST00000564317 THAP9Q9H5L6 903 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 GOLGA2P5Q9HBQ8 144 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 KANSL3Q9P2N6 904 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 DNAJB4Q9UDY4 337 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 DERAQ9Y315 318 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 C2CD2Q9Y426 696 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 PDCD11Q14690 1871 aaKnown RBP16.82■□□□□ 0.28
CDH11-209ENST00000564317 GBF1Q92538 1859 aa16.82■□□□□ 0.28
CDH11-209ENST00000564317 A0A1W2PPC1 479 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 FGFR1OPO95684 399 aaKnown RBP16.81■□□□□ 0.28
CDH11-209ENST00000564317 CA3P07451 260 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 KRT13P13646 458 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 MARSP56192 900 aaKnown RBP16.81■□□□□ 0.28
CDH11-209ENST00000564317 CLDN10P78369 228 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
CDH11-209ENST00000564317 RNASELQ05823 741 aaKnown RBP16.81■□□□□ 0.28
CDH11-209ENST00000564317 TUSC3Q13454 348 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 SURF1Q15526 300 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 CDKAL1Q5VV42 579 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 FRMD5Q7Z6J6 570 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 WDR49Q8IV35 697 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 COLGALT2Q8IYK4 626 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 FIBCD1Q8N539 461 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 PAAF1Q9BRP4 392 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 MTMR12Q9C0I1 747 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 NKX2-4Q9H2Z4 354 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 INTS13Q9NVM9 706 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 FANCLQ9NW38 375 aa16.81■□□□□ 0.28
CDH11-209ENST00000564317 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
CDH11-209ENST00000564317 UBQLN1Q9UMX0 589 aaKnown RBP16.81■□□□□ 0.28
CDH11-209ENST00000564317 TRIP11Q15643 1979 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 IKBKBO14920 756 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 ZC3H11AO75152 810 aaKnown RBP eCLIP16.8■□□□□ 0.28
CDH11-209ENST00000564317 GNA14O95837 355 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 IGFBP6P24592 240 aaPredicted RBP16.8■□□□□ 0.28
CDH11-209ENST00000564317 PBX3P40426 434 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 SLC11A1P49279 550 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 PPP3CAQ08209 521 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 LUZP1Q86V48 1076 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 NT5DC4Q86YG4 428 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 TRIM59Q8IWR1 403 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 RABGGTAQ92696 567 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 SLC35C1Q96A29 364 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 TSPAN18Q96SJ8 248 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 METTL14Q9HCE5 456 aaKnown RBP16.8■□□□□ 0.28
CDH11-209ENST00000564317 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
CDH11-209ENST00000564317 F8W810 466 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 PPEF2O14830 753 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 ZNF18P17022 549 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 TNNI1P19237 187 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 CYP3A5P20815 502 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 BCAR1P56945 870 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
CDH11-209ENST00000564317 ENPEPQ07075 957 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 RAB30Q15771 203 aa16.79■□□□□ 0.28
CDH11-209ENST00000564317 LRIT3Q3SXY7 679 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms