RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 MPZL3Q6UWV2 235 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 GLYCTKQ8IVS8 523 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 SLC44A3Q8N4M1 653 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 C3orf58Q8NDZ4 430 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 SNX27Q96L92 541 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 PNMA5Q96PV4 448 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 TARS2Q9BW92 718 aaKnown RBP18.35■□□□□ 0.53
CCNF-203ENST00000564236 PIDD1Q9HB75 910 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 MYO10Q9HD67 2058 aa18.35■□□□□ 0.53
CCNF-203ENST00000564236 C8AP07357 584 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 SRFP11831 508 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 PLS3P13797 630 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 IGFBP6P24592 240 aaPredicted RBP18.34■□□□□ 0.53
CCNF-203ENST00000564236 SOX4Q06945 474 aaPredicted RBP18.34■□□□□ 0.53
CCNF-203ENST00000564236 HTR4Q13639 388 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 TMEM119Q4V9L6 283 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 LIN9Q5TKA1 542 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 SLC8B1Q6J4K2 584 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 ZPBP2Q6X784 338 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 ANKS3Q6ZW76 656 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 TMEM161BQ8NDZ6 487 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 AK8Q96MA6 479 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 ZMAT2Q96NC0 199 aaKnown RBP18.34■□□□□ 0.53
CCNF-203ENST00000564236 MFSD1Q9H3U5 465 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 DMDP11532 3685 aa18.34■□□□□ 0.53
CCNF-203ENST00000564236 MTCL1Q9Y4B5 1905 aaKnown RBP18.33■□□□□ 0.53
CCNF-203ENST00000564236 MEFVO15553 781 aaPredicted RBP18.33■□□□□ 0.52
CCNF-203ENST00000564236 NARSO43776 548 aaKnown RBP18.33■□□□□ 0.52
CCNF-203ENST00000564236 TOM1L1O75674 476 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 MYBP10242 640 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 MAPTP10636 758 aaKnown RBP18.33■□□□□ 0.52
CCNF-203ENST00000564236 SCP2P22307 547 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 GJB2P29033 226 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 RPL9P32969 192 aaKnown RBP18.33■□□□□ 0.52
CCNF-203ENST00000564236 MCTP1Q6DN14 999 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 RSAD2Q8WXG1 361 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 ACAP3Q96P50 834 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 RTP3Q9BQQ7 232 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 GOLGA2P5Q9HBQ8 144 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 SLC2A4RGQ9NR83 387 aa18.33■□□□□ 0.52
CCNF-203ENST00000564236 SYN3O14994 580 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 SLC16A4O15374 487 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 TBC1D4O60343 1298 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 XYLBO75191 536 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 FSHRP23945 695 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 OR1D2P34982 312 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 NBL1P41271 181 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 MCL1Q07820 350 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 PPM1LQ5SGD2 360 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 AXDND1Q5T1B0 1012 aaPredicted RBP18.32■□□□□ 0.52
CCNF-203ENST00000564236 RSPO2Q6UXX9 243 aaPredicted RBP18.32■□□□□ 0.52
CCNF-203ENST00000564236 GET4Q7L5D6 327 aaPredicted RBP18.32■□□□□ 0.52
CCNF-203ENST00000564236 SIX5Q8N196 739 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 ATOH1Q92858 354 aaPredicted RBP18.32■□□□□ 0.52
CCNF-203ENST00000564236 AVENQ9NQS1 362 aaPredicted RBP18.32■□□□□ 0.52
CCNF-203ENST00000564236 CDH7Q9ULB5 785 aa18.32■□□□□ 0.52
CCNF-203ENST00000564236 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.32■□□□□ 0.52
CCNF-203ENST00000564236 KRBA1A5PL33 1030 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 VWA3AA6NCI4 1184 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 H0Y858 1186 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 ABLIM3O94929 683 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 TKTP29401 623 aaKnown RBP18.31■□□□□ 0.52
CCNF-203ENST00000564236 SMTNP53814 917 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 MRPL58Q14197 206 aaKnown RBP18.31■□□□□ 0.52
CCNF-203ENST00000564236 ARSHQ5FYA8 562 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 GRASPQ7Z6J2 395 aaPredicted RBP18.31■□□□□ 0.52
CCNF-203ENST00000564236 CCDC105Q8IYK2 499 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 SLC7A14Q8TBB6 771 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 FBXL21Q9UKT6 434 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 KCNH3Q9ULD8 1083 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 ODF2LQ9ULJ1 636 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 CDY1Q9Y6F8 540 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 VWA8A3KMH1 1905 aa18.31■□□□□ 0.52
CCNF-203ENST00000564236 DOCK8Q8NF50 2099 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 ARHGEF37A1IGU5 675 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 SFI1A8K8P3 1242 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 H0YCG3 227 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 H3BQV1 296 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 PODXLO00592 558 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 PI15O43692 258 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 BMP15O95972 392 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 PLA2G4BP0C869 781 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 BRCC3P46736 316 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 NCKAP1LP55160 1127 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 STRN3Q13033 797 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 NOLC1Q14978 699 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCNF-203ENST00000564236 SLC10A6Q3KNW5 377 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 PHLDB3Q6NSJ2 640 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 FLCNQ8NFG4 579 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 ZNF461Q8TAF7 563 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 PLEKHA5Q9HAU0 1116 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
CCNF-203ENST00000564236 FAM86C1Q9NVL1 165 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 LARSQ9P2J5 1176 aaKnown RBP18.3■□□□□ 0.52
CCNF-203ENST00000564236 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.3■□□□□ 0.52
CCNF-203ENST00000564236 NUMBLQ9Y6R0 609 aa18.3■□□□□ 0.52
CCNF-203ENST00000564236 ZNF131P52739 623 aa18.29■□□□□ 0.52
CCNF-203ENST00000564236 OSTNP61366 133 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms