RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 POLGP54098 1239 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 TFAMQ00059 246 aaKnown RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 CDO1Q16878 200 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 ARHGEF16Q5VV41 709 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 LRRC55Q6ZSA7 311 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 LARGE2Q8N3Y3 721 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 KRT35Q92764 455 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 NSL1Q96IY1 281 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 SHCBP1LQ9BZQ2 653 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 IL17RBQ9NRM6 502 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PRELPP51888 382 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 STAT2P52630 851 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 ESRRGP62508 458 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 TRIP10Q15642 601 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PDCD2Q16342 344 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 SNX30Q5VWJ9 437 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 CRELD2Q6UXH1 353 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 HAUS6Q7Z4H7 955 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 FBXL13Q8NEE6 735 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 AGR3Q8TD06 166 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 RUSC1Q9BVN2 902 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 NEUROG2Q9H2A3 272 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 RHBDL2Q9NX52 303 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 A8MUI8 341 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 F5H6K3 240 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PYGMP11217 842 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 EIF2AK2P19525 551 aaKnown RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 CCNHP51946 323 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PSMC6P62333 389 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 BTKQ06187 659 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 KLRC3Q07444 240 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 CNGA2Q16280 664 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 MAP7D3Q8IWC1 876 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 DCLK2Q8N568 766 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 ARHGEF26Q96DR7 871 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 MOV10L1Q9BXT6 1211 aaKnown RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PSMC3IPQ9P2W1 217 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 HEY1Q9Y5J3 304 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 ATP9AO75110 1047 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 KRT34O76011 436 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 GH2P01242 217 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 RPA1P27694 616 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 FNTAP49354 379 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 ART3Q13508 389 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 HIC1Q14526 733 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-209ENST00000564068 PPP1R18Q6NYC8 613 aa13.34□□□□□ -0.27
COMMD4-209ENST00000564068 SYNJ2BP-COX16A0A087WUM0 186 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 DENND3A2RUS2 1198 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 GPC4O75487 556 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 RASSF9O75901 435 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 CALB2P22676 271 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SLC30A10Q6XR72 485 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SCFD2Q8WU76 684 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 COX16Q9P0S2 106 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 CNOT7Q9UIV1 285 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 F5H423 210 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 TLR2O60603 784 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 ZBED4O75132 1171 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SGPL1O95470 568 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 RFX1P22670 979 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 ALDH1B1P30837 517 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 CACNA2D1P54289 1103 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 NPEPPSP55786 919 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 OSTNP61366 133 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 RINT1Q6NUQ1 792 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 CCT6BQ92526 530 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SLC5A5Q92911 643 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 MAGEA13PA6NCF6 341 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 HNRNPCL1O60812 293 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 ENTPD5O75356 428 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 KRT38O76015 456 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 ZBED1O96006 694 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 ACADSP16219 412 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 AUHQ13825 339 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 CYTH1Q15438 398 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 RAPH1Q70E73 1250 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 ANO5Q75V66 913 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 FBXO33Q7Z6M2 555 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 DEPDC1BQ8WUY9 529 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SNRNP27Q8WVK2 155 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 WWP1Q9H0M0 922 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 MYLK2Q9H1R3 596 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 MANSC1Q9H8J5 431 aa13.33□□□□□ -0.28
COMMD4-209ENST00000564068 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.33□□□□□ -0.28
COMMD4-209ENST00000564068 PPIP5K2O43314 1243 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 CAMTA2O94983 1202 aa13.32□□□□□ -0.28
COMMD4-209ENST00000564068 RARAP10276 462 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms