RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 DCLRE1AQ6PJP8 1040 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 GET4Q7L5D6 327 aaPredicted RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 C3orf58Q8NDZ4 430 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 LRRC15Q8TF66 581 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 ZMAT2Q96NC0 199 aaKnown RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 NTPCRQ9BSD7 190 aaKnown RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 WDR6Q9NNW5 1121 aaKnown RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 SLC38A7Q9NVC3 462 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 ZDHHC7Q9NXF8 308 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 DAXXQ9UER7 740 aaPredicted RBP19.34■□□□□ 0.69
NME3-205ENST00000563854 KCNG1Q9UIX4 513 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 CLIC4Q9Y696 253 aa19.34■□□□□ 0.69
NME3-205ENST00000563854 TMEM189-UBE2V1I3L0A0 370 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 PODXLO00592 558 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 SLC26A4O43511 780 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 ZMYND10O75800 440 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 MARCKSP29966 332 aaPredicted RBP19.33■□□□□ 0.68
NME3-205ENST00000563854 CEBPZQ03701 1054 aaKnown RBP19.33■□□□□ 0.68
NME3-205ENST00000563854 IER5LQ5T953 404 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 FAM173BQ6P4H8 233 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 CYP26C1Q6V0L0 522 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 MYCT1Q8N699 235 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 RAD54LQ92698 747 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 C18orf25Q96B23 403 aaPredicted RBP19.33■□□□□ 0.68
NME3-205ENST00000563854 PRKD2Q9BZL6 878 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 BLOC1S4Q9NUP1 217 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 FBXW11Q9UKB1 542 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 ODF2LQ9ULJ1 636 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 POLIQ9UNA4 740 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 TRIP11Q15643 1979 aa19.33■□□□□ 0.68
NME3-205ENST00000563854 VWA8A3KMH1 1905 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 H0YCG3 227 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 CLDN3O15551 220 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 TRAPPC3O43617 180 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 N4BP1O75113 896 aaKnown RBP19.32■□□□□ 0.68
NME3-205ENST00000563854 TBCAO75347 108 aaKnown RBP19.32■□□□□ 0.68
NME3-205ENST00000563854 C8AP07357 584 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 FGFR3P22607 806 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 OR1D2P34982 312 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 LIG4P49917 911 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 NCKAP1LP55160 1127 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 PPM1LQ5SGD2 360 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 ALKAL1Q6UXT8 129 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 ZPBP2Q6X784 338 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 HAUS6Q7Z4H7 955 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 MYADMQ96S97 322 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 BACH2Q9BYV9 841 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 KCNH6Q9H252 994 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 CNTN3Q9P232 1028 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 NUB1Q9Y5A7 615 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 CDY1Q9Y6F8 540 aa19.32■□□□□ 0.68
NME3-205ENST00000563854 MUC6Q6W4X9 2439 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 HNRNPDLO14979 420 aaKnown RBP19.31■□□□□ 0.68
NME3-205ENST00000563854 CCL16O15467 120 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 CXCL8P10145 99 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 KCNE1P15382 129 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 SYT1P21579 422 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
NME3-205ENST00000563854 NHLH1Q02575 133 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 SPAG1Q07617 926 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 RESTQ13127 1097 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 XKR4Q5GH76 650 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 CD300LGQ6UXG3 332 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 PRSS33Q8NF86 280 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 SLC7A14Q8TBB6 771 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 LARP4BQ92615 738 aaKnown RBP19.31■□□□□ 0.68
NME3-205ENST00000563854 DDX27Q96GQ7 796 aaKnown RBP19.31■□□□□ 0.68
NME3-205ENST00000563854 MFSD1Q9H3U5 465 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 KCNK12Q9HB15 430 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 PARVGQ9HBI0 331 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 MTRRQ9UBK8 725 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 ZNF318Q5VUA4 2279 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 KMT2EQ8IZD2 1858 aa19.31■□□□□ 0.68
NME3-205ENST00000563854 MTCL1Q9Y4B5 1905 aaKnown RBP19.3■□□□□ 0.68
NME3-205ENST00000563854 MEFVO15553 781 aaPredicted RBP19.3■□□□□ 0.68
NME3-205ENST00000563854 C1RP00736 705 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 ARPP19P56211 112 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 NTHL1P78549 312 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 MCL1Q07820 350 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 TDGQ13569 410 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 ANKS3Q6ZW76 656 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 GRASPQ7Z6J2 395 aaPredicted RBP19.3■□□□□ 0.68
NME3-205ENST00000563854 ST13P5Q8NFI4 369 aaPredicted RBP19.3■□□□□ 0.68
NME3-205ENST00000563854 RSAD2Q8WXG1 361 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 EPSTI1Q96J88 318 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 RHOBTB2Q9BYZ6 727 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 HAPLN2Q9GZV7 340 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 TUBGCP4Q9UGJ1 667 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 WDFY4Q6ZS81 3184 aa19.3■□□□□ 0.68
NME3-205ENST00000563854 MYO10Q9HD67 2058 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 CITO14578 2027 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 AVPR2P30518 371 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 MCM4P33991 863 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 TNFSF9P41273 254 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 RAB33AQ14088 237 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 SLC10A6Q3KNW5 377 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
NME3-205ENST00000563854 RSPO2Q6UXX9 243 aaPredicted RBP19.29■□□□□ 0.68
NME3-205ENST00000563854 USP49Q70CQ1 688 aa19.29■□□□□ 0.68
NME3-205ENST00000563854 TMEM130Q8N3G9 435 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms