RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 TRPC5Q9UL62 973 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 SLC39A10Q9ULF5 831 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 NRXN3Q9Y4C0 1643 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 SYNRGQ9UMZ2 1314 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 DAPK3O43293 454 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SLC4A1P02730 911 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 TPM2P07951 284 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ALOX12P18054 663 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 PDE6CP51160 858 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 RAB1AP62820 205 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 TRPC3Q13507 836 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SCARB2Q14108 478 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 POU4F3Q15319 338 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 TSTQ16762 297 aaKnown RBP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 RSPO4Q2I0M5 234 aaPredicted RBP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 NKAPLQ5M9Q1 402 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ZMYM1Q5SVZ6 1142 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 CIAPIN1Q6FI81 312 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ESRP1Q6NXG1 681 aaKnown RBP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ERC1Q8IUD2 1116 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 TXLNBQ8N3L3 684 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 MARCH10Q8NA82 808 aaPredicted RBP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 NPLOC4Q8TAT6 608 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SYTL5Q8TDW5 730 aaPredicted RBP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 DPF3Q92784 378 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 FBXW5Q969U6 566 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ACAP3Q96P50 834 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 YME1L1Q96TA2 773 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ANO3Q9BYT9 981 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ARHGAP39Q9C0H5 1083 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SEMA4AQ9H3S1 761 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 PANK3Q9H999 370 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SP110Q9HB58 689 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 PICK1Q9NRD5 415 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 KRT84Q9NSB2 600 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 XPO7Q9UIA9 1087 aaKnown RBP5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF711Q9Y462 761 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 FHOD1Q9Y613 1164 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ITSN1Q15811 1721 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 ASXL1Q8IXJ9 1541 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 TTC21BQ7Z4L5 1316 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 PLEKHH1Q9ULM0 1364 aa5.81□□□□□ -1.48
VPS35P1-201ENST00000563400 SMG6Q86US8 1419 aaKnown RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 A0A088AWK7 358 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 A0A1W2PPC4 97 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 H0Y3Z8 333 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 SYT5O00445 386 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 CPLX1O14810 134 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 HTRA2O43464 458 aaPredicted RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 BAG2O95816 211 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 GCP02774 474 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 RARBP10826 455 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 JUPP14923 745 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 NOS3P29474 1203 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 MC4RP32245 332 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 AFMP43652 599 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 SEPHS1P49903 392 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 PAPOLAP51003 745 aaKnown RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 MAP2K6P52564 334 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 FMO1Q01740 532 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 PPP2R5BQ15173 497 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF174Q15697 407 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ATP2B3Q16720 1220 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 KIF4BQ2VIQ3 1234 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF362Q5T0B9 420 aaPredicted RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ZBTB37Q5TC79 503 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 KAZNQ674X7 775 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 SULT6B1Q6IMI4 303 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 B4GALNT4Q76KP1 1039 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 C16orf59Q7L2K0 433 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 UBE3DQ7Z6J8 389 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 SIAH1Q8IUQ4 282 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 HID1Q8IV36 788 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 IL31RAQ8NI17 732 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 XAGE3Q8WTP9 111 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 PPP1R13LQ8WUF5 828 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 RTF1Q92541 710 aaKnown RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 COPS5Q92905 334 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 TIGD1Q96MW7 591 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 C7orf26Q96N11 449 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 IWS1Q96ST2 819 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 BOCQ9BWV1 1114 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 CEP41Q9BYV8 373 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 PAIP1Q9H074 479 aaKnown RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF287Q9HBT7 754 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 CATSPERZQ9NTU4 200 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 TMOD4Q9NZQ9 345 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 MTRRQ9UBK8 725 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ADD3Q9UEY8 706 aaKnown RBP5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 MSRAQ9UJ68 235 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ARHGAP26Q9UNA1 814 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 DAGLAQ9Y4D2 1042 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 BACE2Q9Y5Z0 518 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 ATP23Q9Y6H3 246 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 TNS3Q68CZ2 1445 aa5.8□□□□□ -1.48
VPS35P1-201ENST00000563400 A0A0B4J269 797 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms