RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 KCNA1Q09470 495 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 CD300LGQ6UXG3 332 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 SPATA32Q96LK8 384 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 TRIM9Q9C026 710 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 S1PR5Q9H228 398 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 CD320Q9NPF0 282 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 OLFML3Q9NRN5 406 aa30.88■■■□□ 2.53
NME3-203ENST00000563367 MTCL1Q9Y4B5 1905 aaKnown RBP30.87■■■□□ 2.53
NME3-203ENST00000563367 MYBP10242 640 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 UPP1Q16831 310 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 USP41Q3LFD5 358 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 KIAA1841Q6NSI8 718 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 C18orf25Q96B23 403 aaPredicted RBP30.87■■■□□ 2.53
NME3-203ENST00000563367 HVCN1Q96D96 273 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 MSTO1Q9BUK6 570 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 APOL5Q9BWW9 433 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 SSX2IPQ9Y2D8 614 aa30.87■■■□□ 2.53
NME3-203ENST00000563367 USP15Q9Y4E8 981 aaPredicted RBP30.87■■■□□ 2.53
NME3-203ENST00000563367 SF3B1O75533 1304 aaKnown RBP eCLIP30.87■■■□□ 2.53
NME3-203ENST00000563367 OGTO15294 1046 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 KLRC2P26717 231 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 DCLRE1AQ6PJP8 1040 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 CCDC65Q8IXS2 484 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 UROC1Q96N76 676 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 LRRC27Q9C0I9 530 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 RXFP1Q9HBX9 757 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 SLC38A7Q9NVC3 462 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 KCNH3Q9ULD8 1083 aa30.86■■■□□ 2.53
NME3-203ENST00000563367 TTC26A0AVF1 554 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 TMEM189-UBE2V1I3L0A0 370 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 TEX28O15482 410 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 B3GAT3O94766 335 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 GCNT3O95395 438 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 CLCN4P51793 760 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 SPAG1Q07617 926 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 ENOX2Q16206 610 aaKnown RBP30.85■■■□□ 2.53
NME3-203ENST00000563367 RTP2Q5QGT7 225 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 L1TD1Q5T7N2 865 aaKnown RBP30.85■■■□□ 2.53
NME3-203ENST00000563367 FAM171A1Q5VUB5 890 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 C3orf58Q8NDZ4 430 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 RIN2Q8WYP3 895 aaPredicted RBP30.85■■■□□ 2.53
NME3-203ENST00000563367 HPS3Q969F9 1004 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 C7orf25Q9BPX7 421 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 ATP6V1DQ9Y5K8 247 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 STYXL1Q9Y6J8 313 aa30.85■■■□□ 2.53
NME3-203ENST00000563367 HOXB8P17481 243 aaPredicted RBP30.84■■■□□ 2.53
NME3-203ENST00000563367 AMPD3Q01432 767 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 ZP2Q05996 745 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 KYAT1Q16773 422 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 ADALQ6DHV7 355 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 CNNM4Q6P4Q7 775 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 PPFIBP1Q86W92 1011 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 TMEM130Q8N3G9 435 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 PLEKHA5Q9HAU0 1116 aa30.84■■■□□ 2.53
NME3-203ENST00000563367 CMA1P23946 247 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 CASP1P29466 404 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 KANK3Q6NY19 840 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 PRSS55Q6UWB4 352 aaPredicted RBP30.83■■■□□ 2.53
NME3-203ENST00000563367 C12orf76Q8N812 135 aaPredicted RBP30.83■■■□□ 2.53
NME3-203ENST00000563367 GLIS3Q8NEA6 775 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 SUSD6Q92537 303 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 ACCSQ96QU6 501 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 MAGEF1Q9HAY2 307 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 PRKAG3Q9UGI9 489 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 CPSF3Q9UKF6 684 aaKnown RBP30.83■■■□□ 2.53
NME3-203ENST00000563367 PCDHB13Q9Y5F0 798 aa30.83■■■□□ 2.53
NME3-203ENST00000563367 A0A1B0GVL5 298 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 LACTBL1A8MY62 500 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 RPL17P18621 184 aaKnown RBP30.82■■■□□ 2.52
NME3-203ENST00000563367 ADSSP30520 456 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 ASIC1P78348 528 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 SLFN12LQ6IEE8 588 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 CEP57Q86XR8 500 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 ADHFE1Q8IWW8 467 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 GPR65Q8IYL9 337 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 DDX27Q96GQ7 796 aaKnown RBP30.82■■■□□ 2.52
NME3-203ENST00000563367 TTPALQ9BTX7 342 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 RPF1Q9H9Y2 349 aaKnown RBP30.82■■■□□ 2.52
NME3-203ENST00000563367 TUBGCP4Q9UGJ1 667 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 SERTAD1Q9UHV2 236 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 CDH22Q9UJ99 828 aa30.82■■■□□ 2.52
NME3-203ENST00000563367 C2orf16Q68DN1 1984 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 PODXLO00592 558 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 ADH1AP07327 375 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 ADRB2P07550 413 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 PFKFB1P16118 471 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 ACOT2P49753 483 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 GJD3Q8N144 294 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 FEZF2Q8TBJ5 459 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 FBXL18Q96ME1 805 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 BLZF1Q9H2G9 400 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 EXOC7Q9UPT5 735 aa30.81■■■□□ 2.52
NME3-203ENST00000563367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.8■■■□□ 2.52
NME3-203ENST00000563367 C19orf67A6NJJ6 358 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 I3L4J1 428 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 PRPF6O94906 941 aaKnown RBP30.8■■■□□ 2.52
NME3-203ENST00000563367 AFMP43652 599 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 BRCC3P46736 316 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 PPP2R3AQ06190 1150 aa30.8■■■□□ 2.52
NME3-203ENST00000563367 ELAVL2Q12926 359 aaKnown RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms