RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 ADCY1Q08828 1119 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 TRIM29Q14134 588 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 MXD4Q14582 209 aaPredicted RBP11.21□□□□□ -0.61
SNX29-202ENST00000563308 CATSPER3Q86XQ3 398 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 VPS52Q8N1B4 723 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 C4orf32Q8N8J7 132 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 FBXO18Q8NFZ0 1043 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 SLC39A7Q92504 469 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 PGBD4Q96DM1 585 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 C8orf76Q96K31 380 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 RSAD1Q9HA92 442 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 GREB1Q4ZG55 1949 aa11.21□□□□□ -0.62
SNX29-202ENST00000563308 CNTNAP2Q9UHC6 1331 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 B4GALT5O43286 388 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 N4BP1O75113 896 aaKnown RBP11.2□□□□□ -0.62
SNX29-202ENST00000563308 EFEMP2O95967 443 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 CTSAP10619 480 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 PCBP1Q15365 356 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNX29-202ENST00000563308 ZNF174Q15697 407 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 TPRG1Q6ZUI0 275 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 FEZF2Q8TBJ5 459 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 CCDC51Q96ER9 411 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 LOXL4Q96JB6 756 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 POLR3CQ9BUI4 534 aaPredicted RBP11.2□□□□□ -0.62
SNX29-202ENST00000563308 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
SNX29-202ENST00000563308 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
SNX29-202ENST00000563308 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 IPPQ9Y573 584 aa11.2□□□□□ -0.62
SNX29-202ENST00000563308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 CCDC195A0A1B0GUA6 201 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 ARL5CA6NH57 179 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 CAPN8A6NHC0 703 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 HRO43593 1189 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 POMCP01189 267 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 AXLP30530 894 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 CXCL12P48061 93 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 DSC1Q08554 894 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 HTR4Q13639 388 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 TFDP1Q14186 410 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNX29-202ENST00000563308 NOTUMQ6P988 496 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 GET4Q7L5D6 327 aaPredicted RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 LONP2Q86WA8 852 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 ZSCAN31Q96LW9 406 aaPredicted RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 EDEM2Q9BV94 578 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 GBP3Q9H0R5 595 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 TUFT1Q9NNX1 390 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 MARCH5Q9NX47 278 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 HES2Q9Y543 173 aa11.19□□□□□ -0.62
SNX29-202ENST00000563308 ZFP37Q9Y6Q3 630 aaPredicted RBP11.19□□□□□ -0.62
SNX29-202ENST00000563308 SMG1Q96Q15 3661 aaKnown RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 A0A1B0GUA9 196 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CARNS1A5YM72 827 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 TTLL13PA6NNM8 815 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 C4orf47A7E2U8 309 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CHURC1-FNTBB4DL54 471 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 ANHXE9PGG2 379 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 F8W810 466 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 NRP1O14786 923 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 ERLIN2O94905 339 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 OR52Z1P0C646 297 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 ITGA4P13612 1032 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CSRP1P21291 193 aaKnown RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 RPA1P27694 616 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 FNTBP49356 437 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 TOB1P50616 345 aaPredicted RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 HMGN5P82970 282 aaKnown RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 ORC2Q13416 577 aaPredicted RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 NBR1Q14596 966 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 ECM1Q16610 540 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CDCA2Q69YH5 1023 aaPredicted RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 MTSS1LQ765P7 747 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 TAS1R1Q7RTX1 841 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CDR2LQ86X02 465 aaPredicted RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 NOSTRINQ8IVI9 506 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 COLGALT2Q8IYK4 626 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 RNF168Q8IYW5 571 aaPredicted RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CMASQ8NFW8 434 aaPredicted RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 URGCPQ8TCY9 931 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 SMG7Q92540 1137 aaKnown RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 GAD1Q99259 594 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 TMEM175Q9BSA9 504 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 NXF3Q9H4D5 531 aaKnown RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 SLC32A1Q9H598 525 aa11.18□□□□□ -0.62
SNX29-202ENST00000563308 CCDC86Q9H6F5 360 aaKnown RBP11.18□□□□□ -0.62
SNX29-202ENST00000563308 UBN1Q9NPG3 1134 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms