RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 WDR44Q5JSH3 913 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 OLFML2BQ68BL8 750 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 THNSL1Q8IYQ7 743 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 CEP120Q8N960 986 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 USP6NLQ92738 828 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 ARHGEF26Q96DR7 871 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 EHD2Q9NZN4 543 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 CALCOCO1Q9P1Z2 691 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 GNEQ9Y223 722 aaKnown RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 PASKQ96RG2 1323 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 COL1A2P08123 1366 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 FTLP02792 175 aaPredicted RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 HOXC6P09630 235 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 RHOXF2BP0C7M4 288 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 ZNF865P0CJ78 1059 aaPredicted RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 KRT5P13647 590 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 CYP2B6P20813 491 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 PHKA2P46019 1235 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 FMO1Q01740 532 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 CKAP4Q07065 602 aaKnown RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 AMHR2Q16671 573 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 PTPROQ16827 1216 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 ENOSF1Q7L5Y1 443 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 TMEM192Q8IY95 271 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 SLC35G2Q8TBE7 412 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 CTNNBL1Q8WYA6 563 aaPredicted RBP10.12□□□□□ -0.79
LINC00838-201ENST00000562956 RHOXF2Q9BQY4 288 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 ZNF446Q9NWS9 450 aa10.12□□□□□ -0.79
LINC00838-201ENST00000562956 NCANO14594 1321 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 UMODL1Q5DID0 1318 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 CST3P01034 146 aaPredicted RBP10.11□□□□□ -0.79
LINC00838-201ENST00000562956 TMOD1P28289 359 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 POU5F1BQ06416 359 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 NCOA4Q13772 614 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 DDX1Q92499 740 aaKnown RBP10.11□□□□□ -0.79
LINC00838-201ENST00000562956 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 ZIC5Q96T25 663 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 PNKPQ96T60 521 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 MTMR12Q9C0I1 747 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 ISCUQ9H1K1 167 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 CDT1Q9H211 546 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 SETD4Q9NVD3 440 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
LINC00838-201ENST00000562956 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 TNFSF13BQ9Y275 285 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 ZNF236Q9UL36 1845 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 ANKRD62A6NC57 917 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 A6NJR5 290 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 PHACTR2O75167 634 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 PDE6CP51160 858 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 GRM1Q13255 1194 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 CRHR2Q13324 411 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 IFI16Q16666 785 aaKnown RBP10.11□□□□□ -0.79
LINC00838-201ENST00000562956 WDR49Q8IV35 697 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 KIAA0319LQ8IZA0 1049 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 RFFLQ8WZ73 363 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 GJD2Q9UKL4 321 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 NUB1Q9Y5A7 615 aa10.11□□□□□ -0.79
LINC00838-201ENST00000562956 GPR25O00155 361 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 ACO1P21399 889 aaKnown RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CTGFP29279 349 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 TUBB4BP68371 445 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 NOP14P78316 857 aaKnown RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CDR2Q01850 454 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 C2orf54Q08AI8 447 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CUL2Q13617 745 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 FAM187BQ17R55 369 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 SLFN11Q7Z7L1 901 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 TLK2Q86UE8 772 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 IFNLR1Q8IU57 520 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 MSANTD4Q8NCY6 345 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 NLRP7Q8WX94 980 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 KAT2BQ92831 832 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CPB2Q96IY4 423 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 ZFYVE28Q9HCC9 887 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 RNF216Q9NWF9 866 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 COG5Q9UP83 839 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 TLL2Q9Y6L7 1015 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 RTN2O75298 545 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 INHBEP58166 350 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 ZNF572Q7Z3I7 529 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 DAAM2Q86T65 1068 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 LMBR1Q8WVP7 490 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 FAM81BQ96LP2 452 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CHORDC1Q9UHD1 332 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 MEFVO15553 781 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 BUB1BO60566 1050 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CLSTN1O94985 981 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CLTAP09496 248 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 CXCL8P10145 99 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 RGS2P41220 211 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 TFAMQ00059 246 aaKnown RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 EFCAB13Q8IY85 973 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 PDZD7Q9H5P4 517 aa10.1□□□□□ -0.79
LINC00838-201ENST00000562956 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
LINC00838-201ENST00000562956 TRPM7Q96QT4 1865 aa10.09□□□□□ -0.79
LINC00838-201ENST00000562956 CENPFP49454 3210 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms