RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 GUCY1A2P33402 732 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 KCNC1P48547 511 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 USP14P54578 494 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 PER3P56645 1201 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 MAP9Q49MG5 647 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 KRT40Q6A162 431 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 BORAQ6PGQ7 559 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 SRGAP1Q7Z6B7 1085 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 SP8Q8IXZ3 490 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 TRMT2AQ8IZ69 625 aaKnown RBP7.06□□□□□ -1.28
CHD9-205ENST00000562785 UHRF1Q96T88 793 aaPredicted RBP7.06□□□□□ -1.28
CHD9-205ENST00000562785 GPHA2Q96T91 129 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 ENKD1Q9H0I2 346 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 TMEM60Q9H2L4 133 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 FAM204AQ9H8W3 233 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 KMT5AQ9NQR1 393 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 TDP1Q9NUW8 608 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 PREX1Q8TCU6 1659 aa7.06□□□□□ -1.28
CHD9-205ENST00000562785 PIK3C2BO00750 1634 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 FAM227AF5H4B4 570 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 MATN2O00339 956 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 SLC26A4O43511 780 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 TRIM27P14373 513 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 MAP2K6P52564 334 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 RAB39AQ14964 217 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 ACAP1Q15027 740 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 NT5DC1Q5TFE4 455 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 PLEKHH3Q7Z736 793 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 CMTM4Q8IZR5 234 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 FAM43AQ8N2R8 423 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 TTC17Q96AE7 1141 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 RPL10LQ96L21 214 aaKnown RBP7.05□□□□□ -1.28
CHD9-205ENST00000562785 MRGPRX4Q96LA9 322 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 TOX2Q96NM4 488 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 SAMD11Q96NU1 681 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 DMRTA2Q96SC8 542 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 CGRRF1Q99675 332 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 SARGQ9BW04 601 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 DDX21Q9NR30 783 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHD9-205ENST00000562785 MAN1C1Q9NR34 630 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 KIF1BO60333 1816 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 CLTCQ00610 1675 aaKnown RBP7.05□□□□□ -1.28
CHD9-205ENST00000562785 ADGRB3O60242 1522 aa7.05□□□□□ -1.28
CHD9-205ENST00000562785 NPATQ14207 1427 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 B4GALT4O60513 344 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 MAP4K4O95819 1239 aaPredicted RBP7.04□□□□□ -1.28
CHD9-205ENST00000562785 ZBED1O96006 694 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 FTLP02792 175 aaPredicted RBP7.04□□□□□ -1.28
CHD9-205ENST00000562785 HRGP04196 525 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 AMY1AP04745 511 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 MYBP10242 640 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 RAC3P60763 192 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 ATP8B2P98198 1209 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 SAFB2Q14151 953 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHD9-205ENST00000562785 ZNF572Q7Z3I7 529 aaPredicted RBP7.04□□□□□ -1.28
CHD9-205ENST00000562785 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 C1QL4Q86Z23 238 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 LRRC56Q8IYG6 542 aaPredicted RBP7.04□□□□□ -1.28
CHD9-205ENST00000562785 LGI4Q8N135 537 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 IFI44Q8TCB0 444 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 CCHCR1Q8TD31 782 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 CASKIN2Q8WXE0 1202 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 RAB24Q969Q5 203 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 LRFN3Q9BTN0 628 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 IL23AQ9NPF7 189 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 PUF60Q9UHX1 559 aaKnown RBP7.04□□□□□ -1.28
CHD9-205ENST00000562785 POLHQ9Y253 713 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 STXBP5LQ9Y2K9 1186 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 LAMC1P11047 1609 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 SIGLEC1Q9BZZ2 1709 aa7.04□□□□□ -1.28
CHD9-205ENST00000562785 FER1L4A9Z1Z3 1794 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 TPP1O14773 563 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 PLIN1O60240 522 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 GPR32O75388 356 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 RHCEP18577 417 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 HTR1BP28222 390 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 CASRP41180 1078 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 TXKP42681 527 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 AGFG1P52594 562 aaKnown RBP7.03□□□□□ -1.28
CHD9-205ENST00000562785 HK3P52790 923 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 RHDQ02161 417 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 NOGQ13253 232 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 MTM1Q13496 603 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 KSR2Q6VAB6 950 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 PDZD4Q76G19 769 aaPredicted RBP7.03□□□□□ -1.28
CHD9-205ENST00000562785 RSPH3Q86UC2 560 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 KIAA0319LQ8IZA0 1049 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 ZGPATQ8N5A5 531 aaKnown RBP7.03□□□□□ -1.28
CHD9-205ENST00000562785 C3orf20Q8ND61 904 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 REPS2Q8NFH8 660 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 NEIL1Q96FI4 390 aaPredicted RBP7.03□□□□□ -1.28
CHD9-205ENST00000562785 CLPTM1LQ96KA5 538 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 CDC5LQ99459 802 aaKnown RBP7.03□□□□□ -1.28
CHD9-205ENST00000562785 B3GNT5Q9BYG0 378 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 SENP6Q9GZR1 1112 aaPredicted RBP7.03□□□□□ -1.28
CHD9-205ENST00000562785 LDAHQ9H6V9 325 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 SEC61A2Q9H9S3 476 aa7.03□□□□□ -1.28
CHD9-205ENST00000562785 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms