RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 ZSCAN12O43309 604 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 NDUFA10O95299 355 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 CCDC175P0C221 793 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 TMEM191BP0C7N4 346 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 FERP16591 822 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 SOX5P35711 763 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 PRKCIP41743 596 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 TFAMQ00059 246 aaKnown RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 ARHGAP44Q17R89 818 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 WDR44Q5JSH3 913 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 FBXO46Q6PJ61 603 aaPredicted RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 TRAPPC11Q7Z392 1133 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 IRF2BP2Q7Z5L9 587 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 NT5DC4Q86YG4 428 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 PPM1KQ8N3J5 372 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 ANKRD36BP1Q96IX9 119 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 CCDC42Q96M95 316 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 EIF2AQ9BY44 585 aaKnown RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 TRIM6Q9C030 488 aaPredicted RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 MTMR12Q9C0I1 747 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 TRPV6Q9H1D0 765 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 PLEKHA5Q9HAU0 1116 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 RRAGDQ9NQL2 400 aaPredicted RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 TRMT1Q9NXH9 659 aaKnown RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 ST3GAL5Q9UNP4 418 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 PPP2R2CQ9Y2T4 447 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 ADGRG1Q9Y653 693 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 BZW2Q9Y6E2 419 aaKnown RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 USP27XA6NNY8 438 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 GPR182O15218 404 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 TNNC2P02585 160 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 PLEKP08567 350 aaPredicted RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 CDK7P50613 346 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 MFAP3P55082 362 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 GCNT1Q02742 428 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 KLHL30Q0D2K2 578 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 NCOA4Q13772 614 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 TDRD12Q587J7 1177 aaKnown RBP15.15■□□□□ 0.02
SPG7-206ENST00000562775 FBXO47Q5MNV8 452 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 UBXN11Q5T124 520 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 ENOSF1Q7L5Y1 443 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 DESI2Q9BSY9 194 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 GPR88Q9GZN0 384 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 CHST12Q9NRB3 414 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 C1orf112Q9NSG2 853 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 SNTG2Q9NY99 539 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 C2CD2Q9Y426 696 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 SQORQ9Y6N5 450 aa15.15■□□□□ 0.02
SPG7-206ENST00000562775 HTTP42858 3142 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 EIF3CLB5ME19 914 aaKnown RBP15.14■□□□□ 0.01
SPG7-206ENST00000562775 CCDC172P0C7W6 258 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 EIF4A3P38919 411 aaKnown RBP15.14■□□□□ 0.01
SPG7-206ENST00000562775 YARSP54577 528 aaKnown RBP15.14■□□□□ 0.01
SPG7-206ENST00000562775 ARID5AQ03989 594 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 NFX1Q12986 1120 aaKnown RBP15.14■□□□□ 0.01
SPG7-206ENST00000562775 TWF2Q6IBS0 349 aaKnown RBP15.14■□□□□ 0.01
SPG7-206ENST00000562775 USP38Q8NB14 1042 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 TATDN2Q93075 761 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 KREMEN1Q96MU8 473 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 EIF3CQ99613 913 aaKnown RBP15.14■□□□□ 0.01
SPG7-206ENST00000562775 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 IMPG2Q9BZV3 1241 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 DEF6Q9H4E7 631 aa15.14■□□□□ 0.01
SPG7-206ENST00000562775 CITO14578 2027 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 GOLGA6L9A6NEM1 432 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 FOXN3O00409 490 aaPredicted RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 AKR1B10O60218 316 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 GFPT2O94808 682 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 IPO7O95373 1038 aaKnown RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 NFICP08651 508 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 CKBP12277 381 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 KRT83P78385 493 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 TRPC3Q13507 836 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 TMEM132DQ14C87 1099 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 PKN2Q16513 984 aaKnown RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 SGSM1Q2NKQ1 1148 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 ASTE1Q2TB18 679 aaPredicted RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 ZNF618Q5T7W0 954 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 JADE1Q6IE81 842 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 REXO1L1PQ8IX06 675 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 SHC3Q92529 594 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 KAT5Q92993 513 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 ZNF333Q96JL9 665 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 PPP1R13BQ96KQ4 1090 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 NXF3Q9H4D5 531 aaKnown RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 HAUS4Q9H6D7 363 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 AGO3Q9H9G7 860 aaKnown RBP15.13■□□□□ 0.01
SPG7-206ENST00000562775 ERVK-5Q9HDB9 667 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPG7-206ENST00000562775 DERAQ9Y315 318 aa15.13■□□□□ 0.01
SPG7-206ENST00000562775 EVI5O60447 810 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
SPG7-206ENST00000562775 PNMA6AP0CW24 399 aaPredicted RBP15.12■□□□□ 0.01
SPG7-206ENST00000562775 KIF11P52732 1056 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 LPIN1Q14693 890 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 GPIHBP1Q8IV16 184 aa15.12■□□□□ 0.01
SPG7-206ENST00000562775 ACRBPQ8NEB7 543 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms