RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 GDAQ9Y2T3 454 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 PTGESO14684 152 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 NRP1O14786 923 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 HNRNPDLO14979 420 aaKnown RBP18.1■□□□□ 0.49
CDT1-202ENST00000562747 CLDN3O15551 220 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 GFRA3O60609 400 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 NR1I2O75469 434 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 LIG4P49917 911 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 YARSP54577 528 aaKnown RBP18.1■□□□□ 0.49
CDT1-202ENST00000562747 TPRNQ4KMQ1 711 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
CDT1-202ENST00000562747 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 STAMQ92783 540 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 ZBTB45Q96K62 511 aaPredicted RBP18.1■□□□□ 0.49
CDT1-202ENST00000562747 TRIM9Q9C026 710 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 ZBP1Q9H171 429 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
CDT1-202ENST00000562747 TOPORSQ9NS56 1045 aaPredicted RBP18.1■□□□□ 0.49
CDT1-202ENST00000562747 ANKFY1Q9P2R3 1169 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 SORCS3Q9UPU3 1222 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 NR2E1Q9Y466 385 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 MYO10Q9HD67 2058 aa18.1■□□□□ 0.49
CDT1-202ENST00000562747 ZFHX2Q9C0A1 2572 aaPredicted RBP18.09■□□□□ 0.49
CDT1-202ENST00000562747 H0Y858 1186 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 PPP1R37O75864 691 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 THP07101 528 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 ASGR2P07307 311 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 EPCAMP16422 314 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 CA8P35219 290 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 OR1G1P47890 313 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 ITIH3Q06033 890 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 ALCAMQ13740 583 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
CDT1-202ENST00000562747 RARS2Q5T160 578 aaKnown RBP18.09■□□□□ 0.49
CDT1-202ENST00000562747 CEP120Q8N960 986 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 ACAP3Q96P50 834 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 C7orf25Q9BPX7 421 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 STRA6Q9BX79 667 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 USP25Q9UHP3 1055 aa18.09■□□□□ 0.49
CDT1-202ENST00000562747 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
CDT1-202ENST00000562747 FAM237AA0A1B0GTK4 181 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.08■□□□□ 0.48
CDT1-202ENST00000562747 A0A1W2PQ27 194 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 A0A1W2PQ64 194 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 A0A1W2PQD8 194 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 SLFN14P0C7P3 912 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 PFKFB1P16118 471 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 ANP32AP39687 249 aaKnown RBP18.08■□□□□ 0.48
CDT1-202ENST00000562747 MATR3P43243 847 aaKnown RBP eCLIP18.08■□□□□ 0.48
CDT1-202ENST00000562747 TUSC3Q13454 348 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 MTMR3Q13615 1198 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 KYAT1Q16773 422 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 ZC2HC1CQ53FD0 456 aaPredicted RBP18.08■□□□□ 0.48
CDT1-202ENST00000562747 XKR4Q5GH76 650 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 ALKAL1Q6UXT8 129 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 CEP57L1Q8IYX8 460 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 VPS52Q8N1B4 723 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 TMEM105Q8N8V8 129 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 ATOH1Q92858 354 aaPredicted RBP18.08■□□□□ 0.48
CDT1-202ENST00000562747 SNX27Q96L92 541 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 VN1R3Q9BXE9 311 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 HPSEQ9Y251 543 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 PCDHB13Q9Y5F0 798 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 CFAP54Q96N23 3096 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.48
CDT1-202ENST00000562747 A0A1B0GVL5 298 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 GALR2O43603 387 aaPredicted RBP18.07■□□□□ 0.48
CDT1-202ENST00000562747 GCNT3O95395 438 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 CXCL14O95715 111 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 HARSP12081 509 aaKnown RBP18.07■□□□□ 0.48
CDT1-202ENST00000562747 OSTNP61366 133 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 ASIC1P78348 528 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 NAB2Q15742 525 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 CES5AQ6NT32 575 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 NECTIN4Q96NY8 510 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 COLEC11Q9BWP8 271 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 HAPLN2Q9GZV7 340 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 MARCH5Q9NX47 278 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 TBC1D7Q9P0N9 293 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 EXOC7Q9UPT5 735 aa18.07■□□□□ 0.48
CDT1-202ENST00000562747 PRG3Q9Y2Y8 225 aaPredicted RBP18.07■□□□□ 0.48
CDT1-202ENST00000562747 ACTN4O43707 911 aaKnown RBP18.06■□□□□ 0.48
CDT1-202ENST00000562747 CTSAP10619 480 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 MTHFRP42898 656 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 L1TD1Q5T7N2 865 aaKnown RBP18.06■□□□□ 0.48
CDT1-202ENST00000562747 SLFN12LQ6IEE8 588 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 KIAA1841Q6NSI8 718 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 SLC39A4Q6P5W5 647 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 STXBP4Q6ZWJ1 553 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 UNC13DQ70J99 1090 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 UBALD2Q8IYN6 164 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 SLC22A17Q8WUG5 538 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 PPP1R10Q96QC0 940 aaKnown RBP18.06■□□□□ 0.48
CDT1-202ENST00000562747 ACCSQ96QU6 501 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 CXCL16Q9H2A7 254 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 GDPD2Q9HCC8 539 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 CNTN3Q9P232 1028 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 SERTAD1Q9UHV2 236 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 STYXL1Q9Y6J8 313 aa18.06■□□□□ 0.48
CDT1-202ENST00000562747 CITO14578 2027 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms