RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 DNAJC7Q99615 494 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ASB7Q9H672 318 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 CYP3A43Q9HB55 503 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PARVAQ9NVD7 372 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 SATB2Q9UPW6 733 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 COMMD10Q9Y6G5 202 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 A0A087WUV0 522 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 CCDC151A5D8V7 595 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 SDC4P31431 198 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ADCY8P40145 1251 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PSMC6P62333 389 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ARID5BQ14865 1188 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PTPN21Q16825 1174 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 TLK2Q86UE8 772 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 RUBCNQ92622 972 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PORCNQ9H237 461 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 INPP5FQ9Y2H2 1132 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 EVI5O60447 810 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 TJP3O95049 919 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 IFNB1P01574 187 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ALDH3A1P30838 453 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PSMC4P43686 418 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 GRIK4Q16099 956 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 DEFB115Q30KQ5 88 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 GET4Q7L5D6 327 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 GPR142Q7Z601 462 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 RFX6Q8HWS3 928 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 SPATA20Q8TB22 786 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 C17orf50Q8WW18 174 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 C11orf70Q9BRQ4 267 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 UBN1Q9NPG3 1134 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 LRP5O75197 1615 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 A0A087X0B3 334 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 M0QYV0 167 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 PODXLO00592 558 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 FTCDO95954 541 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 TMEM253P0C7T8 217 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 STAG3L1P0CL83 205 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 NOVP48745 357 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 EPHB4P54760 987 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 LAMTOR4Q0VGL1 99 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 GLYCTKQ8IVS8 523 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 NME8Q8N427 588 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 APPL2Q8NEU8 664 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 DTNBP1Q96EV8 351 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 DDX27Q96GQ7 796 aaKnown RBP8.02□□□□□ -1.12
TCF4-216ENST00000562680 CLMNQ96JQ2 1002 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 GCNAQ96QF7 691 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 TRIM31Q9BZY9 425 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 GPRC5CQ9NQ84 441 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 VAV3Q9UKW4 847 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 FHOD1Q9Y613 1164 aa8.02□□□□□ -1.12
TCF4-216ENST00000562680 TLDC2A0PJX2 215 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 LRRD1A4D1F6 860 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 TMEM88BA6NKF7 163 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 LGALS2P05162 132 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 PAX3P23760 479 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 ACADSBP45954 432 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 CLCN3P51790 818 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 GFPT1Q06210 699 aaPredicted RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 CYP24A1Q07973 514 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 ACBD5Q5T8D3 534 aaPredicted RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 TRIM65Q6PJ69 517 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 RHOT1Q8IXI2 618 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 NT5C1AQ9BXI3 368 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 H7C0C1 242 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 ATP5OP48047 213 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 PSEN2P49810 448 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 CUL1Q13616 776 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 MAPRE1Q15691 268 aaKnown RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 ERCC6LQ2NKX8 1250 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 LCA5Q86VQ0 697 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 NRCAMQ92823 1304 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 CNTNAP1P78357 1384 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 MYH14Q7Z406 1995 aaKnown RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 PFDN1O60925 122 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 PALMO75781 387 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 SRGAP2BP0DMP2 458 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 SLC9A1P19634 815 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 TAF6P49848 677 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 PSMC1P62191 440 aaKnown RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 GTF2BQ00403 316 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 PRPSAP1Q14558 356 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 MYLK4Q86YV6 388 aaPredicted RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 TSPAN18Q96SJ8 248 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 IRS2Q9Y4H2 1338 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 ENC1O14682 589 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 ZFXP17010 805 aaPredicted RBP8.02□□□□□ -1.13
TCF4-216ENST00000562680 PRMT2P55345 433 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 MFSD10Q14728 455 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 LY6KQ17RY6 165 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 C12orf56Q8IXR9 622 aa8.02□□□□□ -1.13
TCF4-216ENST00000562680 CYP26A1O43174 497 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 KLRC4O43908 158 aa8.01□□□□□ -1.13
TCF4-216ENST00000562680 MAFO75444 373 aaPredicted RBP8.01□□□□□ -1.13
TCF4-216ENST00000562680 NAA35Q5VZE5 725 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms