RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 UROC1Q96N76 676 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 GZF1Q9H116 711 aaPredicted RBP14.61□□□□□ -0.07
CDH1-204ENST00000562118 CERS4Q9HA82 394 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 KIAA1586Q9HCI6 787 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 SLC38A7Q9NVC3 462 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 SPG21Q9NZD8 308 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 MTCH2Q9Y6C9 303 aa14.61□□□□□ -0.07
CDH1-204ENST00000562118 LACTBL1A8MY62 500 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 NRP1O14786 923 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 MAPK13O15264 365 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 IL18RAPO95256 599 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 HARSP12081 509 aaKnown RBP14.6□□□□□ -0.07
CDH1-204ENST00000562118 PBX3P40426 434 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 PRCPP42785 496 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 ALDH7A1P49419 539 aaKnown RBP14.6□□□□□ -0.07
CDH1-204ENST00000562118 RNASELQ05823 741 aaKnown RBP14.6□□□□□ -0.07
CDH1-204ENST00000562118 PPP2R3AQ06190 1150 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 ENPEPQ07075 957 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 GPM6BQ13491 265 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 UPP1Q16831 310 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 EDRF1Q3B7T1 1238 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 HS2ST1Q7LGA3 356 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 DDX53Q86TM3 631 aaKnown RBP14.6□□□□□ -0.07
CDH1-204ENST00000562118 NELFCDQ8IXH7 590 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 GPR65Q8IYL9 337 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 CXorf38Q8TB03 319 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 MRPL38Q96DV4 380 aaKnown RBP14.6□□□□□ -0.07
CDH1-204ENST00000562118 RPF1Q9H9Y2 349 aaKnown RBP14.6□□□□□ -0.07
CDH1-204ENST00000562118 MTUS1Q9ULD2 1270 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 STXBP5LQ9Y2K9 1186 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 IRAK3Q9Y616 596 aa14.6□□□□□ -0.07
CDH1-204ENST00000562118 SCN1AP35498 2009 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 GOLGA6L22H0YM25 854 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 RFXAPO00287 272 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 MCM4P33991 863 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 PPP1R2P41236 205 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 AARSP49588 968 aaKnown RBP eCLIP14.59□□□□□ -0.07
CDH1-204ENST00000562118 CLDN10P78369 228 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 HSP90AA2PQ14568 343 aaPredicted RBP14.59□□□□□ -0.07
CDH1-204ENST00000562118 GLRA4Q5JXX5 417 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 SPATA1Q5VX52 437 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 EFCAB13Q8IY85 973 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 SMYD4Q8IYR2 804 aaPredicted RBP14.59□□□□□ -0.07
CDH1-204ENST00000562118 XXYLT1Q8NBI6 393 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 MYLIPQ8WY64 445 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 SAAL1Q96ER3 474 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 MFSD14AQ96MC6 490 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 FAM161BQ96MY7 647 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 PAAF1Q9BRP4 392 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 FAM213AQ9BRX8 229 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 ZBP1Q9H171 429 aa14.59□□□□□ -0.07
CDH1-204ENST00000562118 MYO7AQ13402 2215 aa14.58□□□□□ -0.07
CDH1-204ENST00000562118 ANO9A1A5B4 782 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 PPP1R3GB7ZBB8 358 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 F8W810 466 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 LILRB3O75022 631 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 MBD3O95983 291 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 ALDH2P05091 517 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 NFICP08651 508 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 RPL9P32969 192 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 MATR3P43243 847 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDH1-204ENST00000562118 SNRNP35Q16560 246 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 PDE12Q6L8Q7 609 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 CBWD2Q8IUF1 395 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 C3orf58Q8NDZ4 430 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 POF1BQ8WVV4 589 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 C18orf25Q96B23 403 aaPredicted RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 DDX27Q96GQ7 796 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 FAM193BQ96PV7 902 aaPredicted RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 PCIF1Q9H4Z3 704 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 ALG13Q9NP73 1137 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 CHST7Q9NS84 486 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 RBAKQ9NYW8 714 aaPredicted RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 TUBGCP4Q9UGJ1 667 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 ADAM28Q9UKQ2 775 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 UBQLN1Q9UMX0 589 aaKnown RBP14.58□□□□□ -0.08
CDH1-204ENST00000562118 FAN1Q9Y2M0 1017 aa14.58□□□□□ -0.08
CDH1-204ENST00000562118 UNC80Q8N2C7 3258 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 CLIC2O15247 247 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 KIF4AO95239 1232 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 NR3C1P04150 777 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 CLCNKBP51801 687 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 LRRC63Q05C16 580 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 CYP24A1Q07973 514 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 PSMD6Q15008 389 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 PTPROQ16827 1216 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 SPOUT1Q5T280 376 aaKnown RBP14.57□□□□□ -0.08
CDH1-204ENST00000562118 JADE1Q6IE81 842 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 TMEM169Q96HH4 297 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 DHTKD1Q96HY7 919 aaPredicted RBP14.57□□□□□ -0.08
CDH1-204ENST00000562118 GAS2L1Q99501 681 aaPredicted RBP14.57□□□□□ -0.08
CDH1-204ENST00000562118 HERC2P3Q9BVR0 1158 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 NUP62CLQ9H1M0 184 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 GOLGA2P5Q9HBQ8 144 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 TLR9Q9NR96 1032 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 CACNG4Q9UBN1 327 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 PTPRJQ12913 1337 aa14.57□□□□□ -0.08
CDH1-204ENST00000562118 CASTOR2A6NHX0 329 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms