RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 DENND4AQ7Z401 1863 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 FRMD3A2A2Y4 597 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 LOC730098B7Z3J9 87 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 PI4K2BG5E9Z4 385 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 FAM189A1O60320 539 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 PPP1R37O75864 691 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 CLTAP09496 248 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 CLCNKBP51801 687 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 KYAT1Q16773 422 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
CCDC113-203ENST00000561517 SEZ6Q53EL9 994 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 ZC2HC1CQ53FD0 456 aaPredicted RBP16.9■□□□□ 0.3
CCDC113-203ENST00000561517 RTP2Q5QGT7 225 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 SLC39A4Q6P5W5 647 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
CCDC113-203ENST00000561517 RIN2Q8WYP3 895 aaPredicted RBP16.9■□□□□ 0.3
CCDC113-203ENST00000561517 PIK3R5Q8WYR1 880 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 HVCN1Q96D96 273 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 DDX27Q96GQ7 796 aaKnown RBP16.9■□□□□ 0.3
CCDC113-203ENST00000561517 TTPALQ9BTX7 342 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 CUEDC2Q9H467 287 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 PLEKHA5Q9HAU0 1116 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 GOLGA2P5Q9HBQ8 144 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 CFAP45Q9UL16 551 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 PCDHA7Q9UN72 937 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 ZDHHC9Q9Y397 364 aa16.9■□□□□ 0.3
CCDC113-203ENST00000561517 A0A0B4J269 797 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 TTC26A0AVF1 554 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 OGTO15294 1046 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 B3GAT3O94766 335 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 ADRB2P07550 413 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 IGFBP6P24592 240 aaPredicted RBP16.89■□□□□ 0.29
CCDC113-203ENST00000561517 MATR3P43243 847 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCDC113-203ENST00000561517 CREMQ03060 361 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 DNM1Q05193 864 aaKnown RBP16.89■□□□□ 0.29
CCDC113-203ENST00000561517 RARS2Q5T160 578 aaKnown RBP16.89■□□□□ 0.29
CCDC113-203ENST00000561517 FAM171A1Q5VUB5 890 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 CES5AQ6NT32 575 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 C12orf76Q8N812 135 aaPredicted RBP16.89■□□□□ 0.29
CCDC113-203ENST00000561517 NECTIN4Q96NY8 510 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 TNMDQ9H2S6 317 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 EPHX3Q9H6B9 360 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 KBTBD4Q9NVX7 518 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 RCOR1Q9UKL0 485 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 STYXL1Q9Y6J8 313 aa16.89■□□□□ 0.29
CCDC113-203ENST00000561517 ANKRD63C9JTQ0 380 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 GLUD1P00367 558 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 CXCL8P10145 99 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 FGFR3P22607 806 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
CCDC113-203ENST00000561517 TNFSF9P41273 254 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 MTHFRP42898 656 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 KANK3Q6NY19 840 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 LILRA6Q6PI73 481 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 PRSS55Q6UWB4 352 aaPredicted RBP16.88■□□□□ 0.29
CCDC113-203ENST00000561517 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
CCDC113-203ENST00000561517 C3orf58Q8NDZ4 430 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 LNX1Q8TBB1 728 aaPredicted RBP16.88■□□□□ 0.29
CCDC113-203ENST00000561517 HDAC7Q8WUI4 952 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 SFXN1Q9H9B4 322 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 MRPL44Q9H9J2 332 aaKnown RBP16.88■□□□□ 0.29
CCDC113-203ENST00000561517 CDH22Q9UJ99 828 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 DOCK8Q8NF50 2099 aa16.88■□□□□ 0.29
CCDC113-203ENST00000561517 TECTAO75443 2155 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 PODXLO00592 558 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 TRAPPC3O43617 180 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 PAPLNO95428 1278 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 IDEP14735 1019 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 RPL17P18621 184 aaKnown RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 ZBTB6Q15916 424 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 ZBTB41Q5SVQ8 909 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 SLFN12LQ6IEE8 588 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 CNNM4Q6P4Q7 775 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 PDXDC1Q6P996 788 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 CEP57Q86XR8 500 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 IQUBQ8NA54 791 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 CMASQ8NFW8 434 aaPredicted RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 C18orf25Q96B23 403 aaPredicted RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 RIPOR3Q96MK2 946 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 TSPAN18Q96SJ8 248 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 CLSTN3Q9BQT9 956 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 MSTO1Q9BUK6 570 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 C1QTNF1Q9BXJ1 281 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 LRRC27Q9C0I9 530 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 POMKQ9H5K3 350 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 MAN1C1Q9NR34 630 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 PANK4Q9NVE7 773 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 DPP7Q9UHL4 492 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 CPSF3Q9UKF6 684 aaKnown RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.87■□□□□ 0.29
CCDC113-203ENST00000561517 SCN1AP35498 2009 aa16.87■□□□□ 0.29
CCDC113-203ENST00000561517 TGM5O43548 720 aa16.86■□□□□ 0.29
CCDC113-203ENST00000561517 ALADP13716 330 aa16.86■□□□□ 0.29
CCDC113-203ENST00000561517 ME1P48163 572 aa16.86■□□□□ 0.29
CCDC113-203ENST00000561517 ALCAMQ13740 583 aa16.86■□□□□ 0.29
CCDC113-203ENST00000561517 PSMD5Q16401 504 aa16.86■□□□□ 0.29
CCDC113-203ENST00000561517 ATAT1Q5SQI0 421 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms