RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 PARM1Q6UWI2 310 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 ALKAL1Q6UXT8 129 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 MTSS1LQ765P7 747 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 GRASPQ7Z6J2 395 aaPredicted RBP9.25□□□□□ -0.93
PALB2-202ENST00000561514 NPAS3Q8IXF0 933 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 C4orf32Q8N8J7 132 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 ERMNQ8TAM6 284 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 NELL1Q92832 810 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 KIFAP3Q92845 792 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 FGF13Q92913 245 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 TRIM44Q96DX7 344 aaPredicted RBP9.25□□□□□ -0.93
PALB2-202ENST00000561514 SHDQ96IW2 340 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 ADPGKQ9BRR6 497 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 RPP25Q9BUL9 199 aaKnown RBP9.25□□□□□ -0.93
PALB2-202ENST00000561514 FOXP1Q9H334 677 aaPredicted RBP9.25□□□□□ -0.93
PALB2-202ENST00000561514 CA14Q9ULX7 337 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 TNFSF13BQ9Y275 285 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 SIT1Q9Y3P8 196 aa9.25□□□□□ -0.93
PALB2-202ENST00000561514 TPRP12270 2363 aaKnown RBP9.24□□□□□ -0.93
PALB2-202ENST00000561514 KANSL1LA0AUZ9 987 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ARHGEF37A1IGU5 675 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ARHGEF35A5YM69 484 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 SHISA7A6NL88 538 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ABLIM1O14639 778 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 KIF20AO95235 890 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 SP9P0CG40 484 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 MYBP10242 640 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 PROZP22891 400 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 IGFBP6P24592 240 aaPredicted RBP9.24□□□□□ -0.93
PALB2-202ENST00000561514 MCM7P33993 719 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 MAGEA9P43362 315 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ID4P47928 161 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 GPC5P78333 572 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 NTHL1P78549 312 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 TRIM29Q14134 588 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ECM1Q16610 540 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 AXDND1Q5T1B0 1012 aaPredicted RBP9.24□□□□□ -0.93
PALB2-202ENST00000561514 ATF7IP2Q5U623 682 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 HAUS3Q68CZ6 603 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ZC3H14Q6PJT7 736 aaKnown RBP9.24□□□□□ -0.93
PALB2-202ENST00000561514 ANKS3Q6ZW76 656 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 NOSTRINQ8IVI9 506 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 C1orf210Q8IVY1 113 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 IGSF22Q8N9C0 903 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 C3orf58Q8NDZ4 430 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ITFG1Q8TB96 612 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 SLC7A14Q8TBB6 771 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 HASPINQ8TF76 798 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 KCNN1Q92952 543 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 CLDN23Q96B33 292 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 DDX27Q96GQ7 796 aaKnown RBP9.24□□□□□ -0.93
PALB2-202ENST00000561514 LLPHQ9BRT6 129 aaKnown RBP9.24□□□□□ -0.93
PALB2-202ENST00000561514 GDE1Q9NZC3 331 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 ARHGAP28Q9P2N2 729 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 FBXO4Q9UKT5 387 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 PHLPP2Q6ZVD8 1323 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 F5P12259 2224 aa9.24□□□□□ -0.93
PALB2-202ENST00000561514 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 ACACBO00763 2458 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 SMIM28A0A1B0GU29 152 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 CCL16O15467 120 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 ECI2O75521 394 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 B3GAT3O94766 335 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 MICAL2O94851 1124 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 ABLIM3O94929 683 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 OR1D2P34982 312 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 GRM5P41594 1212 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 PFKPQ01813 784 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 SOX4Q06945 474 aaPredicted RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 MRPL58Q14197 206 aaKnown RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 PDIA5Q14554 519 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.93
PALB2-202ENST00000561514 NFKBIBQ15653 356 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 MLF2Q15773 248 aaPredicted RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 PABPC1LQ4VXU2 614 aaKnown RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 POTEHQ6S545 545 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 MAEAQ7L5Y9 396 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 APBB1IPQ7Z5R6 666 aaPredicted RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 DAW1Q8N136 415 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 SUMF1Q8NBK3 374 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 FBXO18Q8NFZ0 1043 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 ACO2Q99798 780 aaKnown RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 CDT1Q9H211 546 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 LTB4R2Q9NPC1 389 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 CNTN3Q9P232 1028 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 DNMT3BQ9UBC3 853 aaKnown RBP9.23□□□□□ -0.93
PALB2-202ENST00000561514 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 CDY1Q9Y6F8 540 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 R4GN57 208 aa9.23□□□□□ -0.93
PALB2-202ENST00000561514 SPTBN2O15020 2390 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 CACNA1IQ9P0X4 2223 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms