RNA–Protein interactions for RNA: ENST00000561454.1

TCF12-227, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-227	ENST00000561454	SLC13A1	Q9BZW2	595 aa		4.91	□□□□□ -1.62
TCF12-227	ENST00000561454	GOLGA6C	A6NDK9	693 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	GOLGA6B	A6NDN3	693 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	ZNF185	O15231	689 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	GOLGA6D	P0CG33	693 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	RBP3	P10745	1247 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	IARS	P41252	1262 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	LSS	P48449	732 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	IL2	P60568	153 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	NHLH2	Q02577	135 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	ATP13A4	Q4VNC1	1196 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	C4orf46	Q504U0	113 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	BTNL9	Q6UXG8	535 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	SYT12	Q8IV01	421 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	MSL3	Q8N5Y2	521 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	FAM98A	Q8NCA5	519 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	SIMC1	Q8NDZ2	872 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	OR10H5	Q8NGA6	315 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	CHTF18	Q8WVB6	975 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	GPR101	Q96P66	508 aa	Predicted RBP	4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	EMC7	Q9NPA0	242 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	SPTLC3	Q9NUV7	552 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	GOLGA6A	Q9NYA3	693 aa		4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	LUC7L2	Q9Y383	392 aa	Known RBP	4.9	□□□□□ -1.63
TCF12-227	ENST00000561454	MARCH11	A6NNE9	402 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	VSTM5	A8MXK1	200 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	GAS7	O60861	476 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	C1R	P00736	705 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	MYBL2	P10244	700 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	DDX6	P26196	483 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	CXCR5	P32302	372 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	MEF2A	Q02078	507 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	APBA1	Q02410	837 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	FOXI1	Q12951	378 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	OS9	Q13438	667 aa	Predicted RBP	4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	ZBTB41	Q5SVQ8	909 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	LMBR1L	Q6UX01	489 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	GLCCI1	Q86VQ1	547 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	XYLT1	Q86Y38	959 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	GLB1L2	Q8IW92	636 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	CPA6	Q8N4T0	437 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	FBXO41	Q8TF61	875 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	GAB3	Q8WWW8	586 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	RSAD2	Q8WXG1	361 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	ADAM2	Q99965	735 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	ARPC5L	Q9BPX5	153 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	WNT8A	Q9H1J5	351 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	SPON1	Q9HCB6	807 aa		4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	THG1L	Q9NWX6	298 aa	Known RBP	4.89	□□□□□ -1.63
TCF12-227	ENST00000561454	IFRD1	O00458	451 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	ESRRB	O95718	433 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	MT-CO1	P00395	513 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	LTA4H	P09960	611 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	EGR2	P11161	476 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	TRIM27	P14373	513 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	MXRA7	P84157	204 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	MGAT5	Q09328	741 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	KLF1	Q13351	362 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	ODF1	Q14990	250 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	SART3	Q15020	963 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	PDCD4	Q53EL6	469 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	TMEM240	Q5SV17	173 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	CLRN3	Q8NCR9	226 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	TIFA	Q96CG3	184 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	FAXDC2	Q96IV6	333 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	CDC5L	Q99459	802 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	ALG13	Q9NP73	1137 aa	Known RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	MSRA	Q9UJ68	235 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	ZBTB21	Q9ULJ3	1066 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	USP18	Q9UMW8	372 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	ANKRD6	Q9Y2G4	727 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	NUMBL	Q9Y6R0	609 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	FPGT-TNNI3K	V9GXZ4	949 aa		4.88	□□□□□ -1.63
TCF12-227	ENST00000561454	TGM5	O43548	720 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	PCDHGA12	O60330	932 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	PF4V1	P10720	104 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	LPO	P22079	712 aa	Predicted RBP	4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	PHC1	P78364	1004 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	FAP	Q12884	760 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	MPP3	Q13368	585 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	GALE	Q14376	348 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	DHX8	Q14562	1220 aa	Known RBP	4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	BRD3	Q15059	726 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	C19orf54	Q5BKX5	351 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	PAPD7	Q5XG87	772 aa	Known RBP	4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	CYB5RL	Q6IPT4	315 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	EFCAB12	Q6NXP0	572 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	BOLL	Q8N9W6	283 aa	Known RBP	4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	CAGE1	Q8TC20	777 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	AHCYL2	Q96HN2	611 aa	Known RBP	4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	ZNF496	Q96IT1	587 aa	Predicted RBP	4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	LRFN3	Q9BTN0	628 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	SARG	Q9BW04	601 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	TEX101	Q9BY14	249 aa		4.87	□□□□□ -1.63
TCF12-227	ENST00000561454	ANLN	Q9NQW6	1124 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms