RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 PPP1R10Q96QC0 940 aaKnown RBP11.16□□□□□ -0.62
LRRC28-221ENST00000561276 TSPAN18Q96SJ8 248 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 FUCA2Q9BTY2 467 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 MRPL9Q9BYD2 267 aaKnown RBP11.16□□□□□ -0.62
LRRC28-221ENST00000561276 DNAJC25Q9H1X3 360 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 NRDE2Q9H7Z3 1164 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 SLC28A3Q9HAS3 691 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 HCSTQ9UBK5 93 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 LINC01553A4QN01 128 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 MAPK13O15264 365 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 CYP24A1Q07973 514 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 GRIK3Q13003 919 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 TUSC3Q13454 348 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 SURF1Q15526 300 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 NAB2Q15742 525 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 SPOUT1Q5T280 376 aaKnown RBP11.15□□□□□ -0.62
LRRC28-221ENST00000561276 BRSK2Q8IWQ3 736 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 ZC3H3Q8IXZ2 948 aaKnown RBP11.15□□□□□ -0.62
LRRC28-221ENST00000561276 FAM186BQ8IYM0 893 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 LRRC43Q8N309 656 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 PARD3BQ8TEW8 1205 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 C18orf25Q96B23 403 aaPredicted RBP11.15□□□□□ -0.62
LRRC28-221ENST00000561276 CCDC127Q96BQ5 260 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 KIF12Q96FN5 646 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 CEP63Q96MT8 703 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 POP1Q99575 1024 aaKnown RBP11.15□□□□□ -0.62
LRRC28-221ENST00000561276 NKX2-4Q9H2Z4 354 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 SLC38A7Q9NVC3 462 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.62
LRRC28-221ENST00000561276 MRPL42Q9Y6G3 142 aaKnown RBP11.15□□□□□ -0.62
LRRC28-221ENST00000561276 PLXNA4Q9HCM2 1894 aa11.15□□□□□ -0.63
LRRC28-221ENST00000561276 B4GALT3O60512 393 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 ZC3H11AO75152 810 aaKnown RBP eCLIP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 ARHGEF15O94989 841 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 FGFR1OPO95684 399 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 NFICP08651 508 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 DLATP10515 647 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 EPB41P11171 864 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 TNNI1P19237 187 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 DNAJB2P25686 324 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 BCAR1P56945 870 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 DLG4P78352 724 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 TAP1Q03518 808 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 SOX4Q06945 474 aaPredicted RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 DSC1Q08554 894 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM132DQ14C87 1099 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 PSMD6Q15008 389 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 TPD52L1Q16890 204 aaPredicted RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 SPATA1Q5VX52 437 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 KCNT2Q6UVM3 1135 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 CREBRFQ8IUR6 639 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 COLGALT2Q8IYK4 626 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 ENOX1Q8TC92 643 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 TMC2Q8TDI7 906 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 CACTINQ8WUQ7 758 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 CLP1Q92989 425 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 BORCS6Q96GS4 357 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 FNBP1Q96RU3 617 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 MKNK1Q9BUB5 465 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 NAT10Q9H0A0 1025 aaKnown RBP11.14□□□□□ -0.63
LRRC28-221ENST00000561276 GOLGA2P5Q9HBQ8 144 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 AAASQ9NRG9 546 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 DPP3Q9NY33 737 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 CACNG4Q9UBN1 327 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 DERAQ9Y315 318 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 C2CD2Q9Y426 696 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 CEP290O15078 2479 aa11.14□□□□□ -0.63
LRRC28-221ENST00000561276 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 CASTOR2A6NHX0 329 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 NT5C1B-RDH14C9J2C7 533 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 SOX1O00570 391 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 NRP1O14786 923 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 XPOTO43592 962 aaKnown RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 GALTP07902 379 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 LINC00271P0C7V0 271 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 KRT13P13646 458 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 CYP3A5P20815 502 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 BMPR1AP36894 532 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 PBX3P40426 434 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 OR1G1P47890 313 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 ZNF165P49910 485 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 CLCNKBP51801 687 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 VAMP7P51809 220 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 MCCD1P59942 119 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 TFAMQ00059 246 aaKnown RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 LMBRD2Q68DH5 695 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
LRRC28-221ENST00000561276 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 NT5DC4Q86YG4 428 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 IRF2BP1Q8IU81 584 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 EFCAB13Q8IY85 973 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 ZNF516Q92618 1163 aa11.13□□□□□ -0.63
LRRC28-221ENST00000561276 RABGGTAQ92696 567 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms