RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SLC9A9Q8IVB4 645 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 NAP1L3Q99457 506 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 PACSIN1Q9BY11 444 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 ZDHHC18Q9NUE0 388 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 CTTNBP2NLQ9P2B4 639 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 PRKAG3Q9UGI9 489 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 SETSIPP0DME0 302 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 IMPDH2P12268 514 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 QARSP47897 775 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 FMO5P49326 533 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 CYP2J2P51589 502 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 NPEPPSP55786 919 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 PTENP60484 403 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 SPP2Q13103 211 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 DHX34Q14147 1143 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 PPP1R15BQ5SWA1 713 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 NBPF12Q5TAG4 269 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 DUPD1Q68J44 220 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 KIF2BQ8N4N8 673 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 GRAMD1AQ96CP6 724 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 RBM41Q96IZ5 413 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 TMEM237Q96Q45 408 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 LRMDAQ9H2I8 198 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 TBC1D22BQ9NU19 505 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 PARP2Q9UGN5 583 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 FRMD4BQ9Y2L6 1034 aa14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 CTDP1Q9Y5B0 961 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-220ENST00000560998 SPDYE5A6NIY4 337 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 SHBGP04278 402 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 MAPTP10636 758 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 SP100P23497 879 aaPredicted RBP14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 ATP5DP30049 168 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 RARRES1P49788 294 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 PEX5P50542 639 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 MYBPC2Q14324 1141 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 WASHC2DQ5SRD0 308 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 GJB7Q6PEY0 223 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 ATL2Q8NHH9 583 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 ASAP3Q8TDY4 903 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 DYDC1Q8WWB3 177 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 KIFAP3Q92845 792 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 ROPN1BQ9BZX4 212 aaPredicted RBP14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 DPH5Q9H2P9 285 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 ROPN1Q9HAT0 212 aaPredicted RBP14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 RASAL2Q9UJF2 1139 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 INTUQ9ULD6 942 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 NENFQ9UMX5 172 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 CD2APQ9Y5K6 639 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 MROH7Q68CQ1 1323 aa14.9□□□□□ -0.02
RABGGTA-220ENST00000560998 K7ENM7 598 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 VWA5AO00534 786 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 COQ9O75208 318 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 FDX1P10109 184 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 RAD23BP54727 409 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 RNF207Q6ZRF8 634 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 PEX26Q7Z412 305 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 RBM12BQ8IXT5 1001 aaKnown RBP14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 SYCP3Q8IZU3 236 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 TPCN2Q8NHX9 752 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 KCNV2Q8TDN2 545 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 INPP5DQ92835 1189 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 IFT43Q96FT9 208 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 RMDN3Q96TC7 470 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 PDCD2LQ9BRP1 358 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 ERP44Q9BS26 406 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 FAM192AQ9GZU8 254 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 LRRC4CQ9HCJ2 640 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 PXMP2Q9NR77 195 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 LTBP3Q9NS15 1303 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 RLFQ13129 1914 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 PEX11AO75192 247 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 TPBGLP0DKB5 382 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 MYCLP12524 364 aaPredicted RBP14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 SH3BGRP55822 239 aaPredicted RBP14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 ALCAMQ13740 583 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 UGCGQ16739 394 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 TMEM154Q6P9G4 183 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 MAEAQ7L5Y9 396 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 FBXO41Q8TF61 875 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 DNAJC9Q8WXX5 260 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 ATG4CQ96DT6 458 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 WNK4Q96J92 1243 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 SYT15Q9BQS2 421 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 KLHL14Q9P2G3 628 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 LARSQ9P2J5 1176 aaKnown RBP14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 ZNF112Q9UJU3 913 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 NAGPAQ9UK23 515 aa14.89□□□□□ -0.03
RABGGTA-220ENST00000560998 COL11A1P12107 1806 aaPredicted RBP14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 FZD9O00144 591 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 PLS3P13797 630 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 MAGEA8P43361 318 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 PSMC4P43686 418 aa14.88□□□□□ -0.03
RABGGTA-220ENST00000560998 IFNAR2P48551 515 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms