RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MRRFQ96E11 262 aaKnown RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 SYT3Q9BQG1 590 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 C1QTNF3Q9BXJ4 246 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 TMOD4Q9NZQ9 345 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 MARCH2Q9P0N8 246 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 NRBP1Q9UHY1 535 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 SMG1Q96Q15 3661 aaKnown RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 ZNF536O15090 1300 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 MROH7Q68CQ1 1323 aa4.68□□□□□ -1.66
HERC1-211ENST00000560983 TPRP12270 2363 aaKnown RBP4.68□□□□□ -1.66
HERC1-211ENST00000560983 TECTAO75443 2155 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 LCHNA4D1U4 455 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 ATF4P18848 351 aaPredicted RBP4.67□□□□□ -1.66
HERC1-211ENST00000560983 LTBRP36941 435 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 ITGA1P56199 1179 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 ZXDAP98168 799 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 NEXNQ0ZGT2 675 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 PUM1Q14671 1186 aaKnown RBP eCLIP4.67□□□□□ -1.66
HERC1-211ENST00000560983 SMAD2Q15796 467 aaKnown RBP4.67□□□□□ -1.66
HERC1-211ENST00000560983 SHROOM1Q2M3G4 852 aaPredicted RBP4.67□□□□□ -1.66
HERC1-211ENST00000560983 CAVIN4Q5BKX8 364 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 ACBD5Q5T8D3 534 aaPredicted RBP4.67□□□□□ -1.66
HERC1-211ENST00000560983 IQCEQ6IPM2 695 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 LBX2Q6XYB7 198 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 CATSPERGQ6ZRH7 1159 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 HERC6Q8IVU3 1022 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 CCDC103Q8IW40 242 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 TEX2Q8IWB9 1127 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 RPUSD2Q8IZ73 545 aaKnown RBP4.67□□□□□ -1.66
HERC1-211ENST00000560983 VGLL2Q8N8G2 317 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 C8orf58Q8NAV2 365 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 SLC43A3Q8NBI5 491 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 PHOSPHO2Q8TCD6 241 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 GDPD5Q8WTR4 605 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 NKD2Q969F2 451 aaPredicted RBP4.67□□□□□ -1.66
HERC1-211ENST00000560983 MAML3Q96JK9 1138 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 AP5M1Q9H0R1 490 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 HIPK3Q9H422 1215 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 AS3MTQ9HBK9 375 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 DLL3Q9NYJ7 618 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 ACACBO00763 2458 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 MAPK8IP3Q9UPT6 1336 aa4.67□□□□□ -1.66
HERC1-211ENST00000560983 GVINP1Q7Z2Y8 2422 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 SPEGQ15772 3267 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 C22orf46C9J442 243 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 C1QTNF3-AMACRE9PGA6 284 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 NOP56O00567 594 aaKnown RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 CTAGE5O15320 804 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 SMARCA5O60264 1052 aaPredicted RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 PLATP00750 562 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 ASGR1P07306 291 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 ZNF853P0CG23 659 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 FGFR2P21802 821 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 RHBDL3P58872 404 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 SMAD4Q13485 552 aaKnown RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 PICALMQ13492 652 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 CCDC57Q2TAC2 916 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 CR1LQ2VPA4 569 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 MROH9Q5TGP6 573 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 G2E3Q7L622 706 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 FAM26EQ8N5C1 309 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 WDR66Q8TBY9 1149 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 USP33Q8TEY7 942 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 DDX1Q92499 740 aaKnown RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 SCLYQ96I15 445 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 GLT1D1Q96MS3 346 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 LGR4Q9BXB1 951 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 MOV10L1Q9BXT6 1211 aaKnown RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 PNNQ9H307 717 aaKnown RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 ACBD3Q9H3P7 528 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 TMEFF2Q9UIK5 374 aaPredicted RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 TIMM13Q9Y5L4 95 aaPredicted RBP4.66□□□□□ -1.66
HERC1-211ENST00000560983 GRIN2DO15399 1336 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 SYNRGQ9UMZ2 1314 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 A0A0G2JMZ2 1700 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 WDR87Q6ZQQ6 2873 aa4.66□□□□□ -1.66
HERC1-211ENST00000560983 A0A0U1RQG5 324 aaPredicted RBP4.65□□□□□ -1.67
HERC1-211ENST00000560983 KIF28PB7ZC32 967 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 TBX1O43435 398 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 PDE8BO95263 885 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ASNSP08243 561 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 AKR1A1P14550 325 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ZNF28P17035 718 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 FPR2P25090 351 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 CST5P28325 142 aaPredicted RBP4.65□□□□□ -1.67
HERC1-211ENST00000560983 HOXC12P31275 282 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ERVK-21P61565 698 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 RPL11P62913 178 aaKnown RBP4.65□□□□□ -1.67
HERC1-211ENST00000560983 LMOD3Q0VAK6 560 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 KCNAB2Q13303 367 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ADAM9Q13443 819 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 LRRC24Q50LG9 513 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 EMC4Q5J8M3 183 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ZNF227Q86WZ6 799 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ABRAQ8N0Z2 381 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 CPLX3Q8WVH0 158 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 BTN2A2Q8WVV5 523 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 PABPC5Q96DU9 382 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms