RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TRAPPC3O43617 180 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 PTPN2P17706 415 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 LAIR1Q6GTX8 287 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 TSSK4Q6SA08 328 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 ANKS3Q6ZW76 656 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 CENPQQ7L2Z9 268 aaPredicted RBP20.48■□□□□ 0.87
TPM1-226ENST00000560959 ZBTB8OSQ8IWT0 167 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 MCPH1Q8NEM0 835 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 MCRS1Q96EZ8 462 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 TM6SF1Q9BZW5 370 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 C2orf40Q9H1Z8 148 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 PDZD7Q9H5P4 517 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 RAB23Q9ULC3 237 aa20.48■□□□□ 0.87
TPM1-226ENST00000560959 LRRIQ4A6NIV6 560 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 RECQL4O94761 1208 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 TANGO2Q6ICL3 276 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 ZNF461Q8TAF7 563 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 NETO1Q8TDF5 533 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 OXER1Q8TDS5 423 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 ING5Q8WYH8 240 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 UROC1Q96N76 676 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 ADPGKQ9BRR6 497 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 PARD6AQ9NPB6 346 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 CDY1Q9Y6F8 540 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 STK36Q9NRP7 1315 aa20.47■□□□□ 0.87
TPM1-226ENST00000560959 ZFHX4Q86UP3 3567 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 COL4A3Q01955 1670 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 B3GAT3O94766 335 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 RETP07949 1114 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 SLC5A9Q2M3M2 681 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 SLC8B1Q6J4K2 584 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 SKAP1Q86WV1 359 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 TTC12Q9H892 705 aaPredicted RBP20.46■□□□□ 0.87
TPM1-226ENST00000560959 ZFP14Q9HCL3 533 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 SPTBN2O15020 2390 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 NOTCH4Q99466 2003 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 ARID2Q68CP9 1835 aa20.46■□□□□ 0.87
TPM1-226ENST00000560959 ACKR2O00590 384 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 ZNF197O14709 1029 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 SLC30A4O14863 429 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 ABLIM3O94929 683 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 CCR3P51677 355 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 MLLT6P55198 1093 aaPredicted RBP20.45■□□□□ 0.86
TPM1-226ENST00000560959 STK3Q13188 491 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 PRPF4BQ13523 1007 aaKnown RBP20.45■□□□□ 0.86
TPM1-226ENST00000560959 MAPK6Q16659 721 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 EARS2Q5JPH6 523 aaKnown RBP20.45■□□□□ 0.86
TPM1-226ENST00000560959 POTEHQ6S545 545 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 PIGOQ8TEQ8 1089 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 IRF7Q92985 503 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 TRMT61BQ9BVS5 477 aaKnown RBP20.45■□□□□ 0.86
TPM1-226ENST00000560959 BRD9Q9H8M2 597 aa20.45■□□□□ 0.86
TPM1-226ENST00000560959 FOXD2O60548 495 aaPredicted RBP20.44■□□□□ 0.86
TPM1-226ENST00000560959 USO1O60763 962 aaKnown RBP20.44■□□□□ 0.86
TPM1-226ENST00000560959 FCARP24071 287 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 CALCRLQ16602 461 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 UPP1Q16831 310 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 PRSS36Q5K4E3 855 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 CD300LGQ6UXG3 332 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 MAP4K3Q8IVH8 894 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 NOSTRINQ8IVI9 506 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 PPP1R10Q96QC0 940 aaKnown RBP20.44■□□□□ 0.86
TPM1-226ENST00000560959 CXCL16Q9H2A7 254 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 GPRC5CQ9NQ84 441 aa20.44■□□□□ 0.86
TPM1-226ENST00000560959 TTLL13PA6NNM8 815 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 LRG1P02750 347 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 ATF2P15336 505 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 CEBPBP17676 345 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 ATP2B1P20020 1258 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 ELF1P32519 619 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 CNR2P34972 360 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 CLCNKBP51801 687 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 SCRN1Q12765 414 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 ST3GAL2Q16842 350 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 DCAF4L1Q3SXM0 396 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 TCEAL8Q8IYN2 117 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 TNFRSF25Q93038 417 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 DDX27Q96GQ7 796 aaKnown RBP20.43■□□□□ 0.86
TPM1-226ENST00000560959 CCDC113Q9H0I3 377 aa20.43■□□□□ 0.86
TPM1-226ENST00000560959 TKTP29401 623 aaKnown RBP20.42■□□□□ 0.86
TPM1-226ENST00000560959 SPEM2Q0P670 501 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 FAM78AQ5JUQ0 283 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 DEPDC1BQ8WUY9 529 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 FAM3CQ92520 227 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 WASF1Q92558 559 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 ASB16Q96NS5 453 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 MTMR9Q96QG7 549 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
TPM1-226ENST00000560959 LMAN1LQ9HAT1 526 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 ZNF334Q9HCZ1 680 aaPredicted RBP20.42■□□□□ 0.86
TPM1-226ENST00000560959 TUFT1Q9NNX1 390 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 GJB4Q9NTQ9 266 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 MAFFQ9ULX9 164 aa20.42■□□□□ 0.86
TPM1-226ENST00000560959 NDRG2Q9UN36 371 aaKnown RBP20.42■□□□□ 0.86
TPM1-226ENST00000560959 PRKCBP05771 671 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 SPATA31C1P0DKV0 1188 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 PSMC3P17980 439 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 KRT2P35908 639 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 NAMPTP43490 491 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 CXCL12P48061 93 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms