RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 MXD4Q14582 209 aaPredicted RBP10.99□□□□□ -0.65
TPM1-225ENST00000560679 INF2Q27J81 1249 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 XKR9Q5GH70 373 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 FAM78AQ5JUQ0 283 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 CD300LGQ6UXG3 332 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 VITQ6UXI7 678 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
TPM1-225ENST00000560679 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.99□□□□□ -0.65
TPM1-225ENST00000560679 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 BLIDQ8IZY5 108 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 DAGLBQ8NCG7 672 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 HAS1Q92839 578 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
TPM1-225ENST00000560679 AGXT2Q9BYV1 514 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 C22orf23Q9BZE7 217 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 RXFP3Q9NSD7 469 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 C2orf42Q9NWW7 574 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 CDY1Q9Y6F8 540 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 PIAS3Q9Y6X2 628 aa10.99□□□□□ -0.65
TPM1-225ENST00000560679 FASNP49327 2511 aaKnown RBP10.98□□□□□ -0.65
TPM1-225ENST00000560679 ARHGEF37A1IGU5 675 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 ARNTLO00327 626 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 MAN2B1O00754 1011 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 RECQL4O94761 1208 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 PAPSS2O95340 614 aaPredicted RBP10.98□□□□□ -0.65
TPM1-225ENST00000560679 FGFR3P22607 806 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 ARL2P36404 184 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 FGD1P98174 961 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 TFDP1Q14186 410 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 CTTNQ14247 550 aaKnown RBP10.98□□□□□ -0.65
TPM1-225ENST00000560679 KRT32Q14532 448 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 PPP2R5DQ14738 602 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 EPHA7Q15375 998 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 SF3A2Q15428 464 aaKnown RBP10.98□□□□□ -0.65
TPM1-225ENST00000560679 FBXL16Q8N461 479 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 FAM3CQ92520 227 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 AIFM3Q96NN9 605 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 ASB16Q96NS5 453 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 BRD9Q9H8M2 597 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 LMAN1LQ9HAT1 526 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 ZNF334Q9HCZ1 680 aaPredicted RBP10.98□□□□□ -0.65
TPM1-225ENST00000560679 PKD1L2Q7Z442 2459 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 AKAP13Q12802 2813 aa10.98□□□□□ -0.65
TPM1-225ENST00000560679 SMG1Q96Q15 3661 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 WDR27A2RRH5 827 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 TMEM189-UBE2V1I3L0A0 370 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 EDN1P05305 212 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 TKTP29401 623 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 CXCL12P48061 93 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 LIMK1P53667 647 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 CCT2P78371 535 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 NCBP1Q09161 790 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 ELAVL2Q12926 359 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 PTGDRQ13258 359 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 NCAPH2Q6IBW4 605 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 PDXDC1Q6P996 788 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 Q6ZS52 159 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 RTL10Q7L3V2 364 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 C3orf58Q8NDZ4 430 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 DDX1Q92499 740 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 KCNB2Q92953 911 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 ZSWIM3Q96MP5 696 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 CORO1BQ9BR76 489 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 TRMT61BQ9BVS5 477 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 POLR3FQ9H1D9 316 aaPredicted RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 PDZD7Q9H5P4 517 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 ZSWIM4Q9H7M6 989 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 ZFP14Q9HCL3 533 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 TRPV5Q9NQA5 729 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 RBM12Q9NTZ6 932 aaKnown RBP10.97□□□□□ -0.65
TPM1-225ENST00000560679 SNTG2Q9NY99 539 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 BACE2Q9Y5Z0 518 aa10.97□□□□□ -0.65
TPM1-225ENST00000560679 I3L4J1 428 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 MOSPD3O75425 235 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 THP07101 528 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 PROS1P07225 676 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 CCNE1P24864 410 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 PDIA3P30101 505 aaKnown RBP10.96□□□□□ -0.65
TPM1-225ENST00000560679 GDI1P31150 447 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 ROR1Q01973 937 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 CCDC6Q16204 474 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 CDCA2Q69YH5 1023 aaPredicted RBP10.96□□□□□ -0.65
TPM1-225ENST00000560679 HEATR6Q6AI08 1181 aaKnown RBP10.96□□□□□ -0.65
TPM1-225ENST00000560679 IL31Q6EBC2 164 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 OTUD6AQ7L8S5 288 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 LONP2Q86WA8 852 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 SPEM1Q8N4L4 309 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 IRF7Q92985 503 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
TPM1-225ENST00000560679 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.65
TPM1-225ENST00000560679 SLKQ9H2G2 1235 aaPredicted RBP10.96□□□□□ -0.65
TPM1-225ENST00000560679 GPRC5CQ9NQ84 441 aa10.96□□□□□ -0.65
TPM1-225ENST00000560679 LAMA5O15230 3695 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms