RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 UPP1Q16831 310 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 RINT1Q6NUQ1 792 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 C1orf186Q6ZWK4 172 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 CEP57Q86XR8 500 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 FLCNQ8NFG4 579 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 ZMAT2Q96NC0 199 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 PNMA5Q96PV4 448 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 RAB34Q9BZG1 259 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 MFSD1Q9H3U5 465 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 TMEM134Q9H6X4 195 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 STK24Q9Y6E0 443 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
SNRPA1-212ENST00000560496 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.63
SNRPA1-212ENST00000560496 TICRRQ7Z2Z1 1910 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 SMIM28A0A1B0GU29 152 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 I3L4J1 428 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 K7ERI5 159 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 GFRA3O60609 400 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 CFHP08603 1231 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 HNRNPA1P09651 372 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 LAMP2P13473 410 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 NBL1P41271 181 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 BRCC3P46736 316 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 RAB33AQ14088 237 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 TMEM119Q4V9L6 283 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 LIN9Q5TKA1 542 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 KRT79Q5XKE5 535 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 GRASPQ7Z6J2 395 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 CCDC105Q8IYK2 499 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 SLC44A3Q8N4M1 653 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 SLC7A14Q8TBB6 771 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 LRRC15Q8TF66 581 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 ATOH1Q92858 354 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 FGF14Q92915 247 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 TMX3Q96JJ7 454 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 DRC1Q96MC2 740 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 UROC1Q96N76 676 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 MRPL4Q9BYD3 311 aaKnown RBP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 PIDD1Q9HB75 910 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 NUMBLQ9Y6R0 609 aa11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 NUP210Q8TEM1 1887 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-212ENST00000560496 PRR23AA6NEV1 266 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 CCDC169A6NNP5 214 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 SLC16A4O15374 487 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 CCL16O15467 120 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 B3GAT3O94766 335 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 MCF2P10911 925 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 KCNE1P15382 129 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 FSHRP23945 695 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 SLC12A3P55017 1021 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 OSTNP61366 133 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 RILPL1Q5EBL4 403 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 PPM1LQ5SGD2 360 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 PDXDC1Q6P996 788 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 MPZL3Q6UWV2 235 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 ASCL5Q7RTU5 278 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 TMEM161BQ8NDZ6 487 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 ST13P5Q8NFI4 369 aaPredicted RBP11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 ITFG1Q8TB96 612 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 GPR152Q8TDT2 470 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 NXPE3Q969Y0 559 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 CCDC94Q9BW85 323 aaPredicted RBP11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 HAPLN2Q9GZV7 340 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 IRF2BPLQ9H1B7 796 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 C17orf75Q9HAS0 396 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 KMT5AQ9NQR1 393 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 TOPORSQ9NS56 1045 aaPredicted RBP11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 HCFC1R1Q9NWW0 138 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 WNT16Q9UBV4 365 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 CA14Q9ULX7 337 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 DNM3Q9UQ16 869 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 TCHHQ07283 1943 aa11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
SNRPA1-212ENST00000560496 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 SFI1A8K8P3 1242 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 PODXLO00592 558 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 ST18O60284 1047 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 MAPTP10636 758 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 GJB2P29033 226 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 OR1D2P34982 312 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 YARSP54577 528 aaKnown RBP11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 NCKAP1LP55160 1127 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 ROR1Q01973 937 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 NOLC1Q14978 699 aaKnown RBP eCLIP11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 SLC8B1Q6J4K2 584 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 PARM1Q6UWI2 310 aa11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 APBB1IPQ7Z5R6 666 aaPredicted RBP11.12□□□□□ -0.63
SNRPA1-212ENST00000560496 NPAS3Q8IXF0 933 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms