RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, human

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-222	ENST00000560494	COPS5	Q92905	334 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	C16orf70	Q9BSU1	422 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	DNAI2	Q9GZS0	605 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	AP5M1	Q9H0R1	490 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	ACBD3	Q9H3P7	528 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	ASB7	Q9H672	318 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	PUF60	Q9UHX1	559 aa	Known RBP	13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	CPSF3	Q9UKF6	684 aa	Known RBP	13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	RAB21	Q9UL25	225 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	AKT3	Q9Y243	479 aa		13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.82	□□□□□ -0.2
SLTM-222	ENST00000560494	BUB1	O43683	1085 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	MTA2	O94776	668 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	ERLIN2	O94905	339 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	TMEM191B	P0C7N4	346 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	P4HA1	P13674	534 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	CYP11B1	P15538	503 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	ACOT2	P49753	483 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	RBM10	P98175	930 aa	Known RBP	13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	TRPC3	Q13507	836 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	CUL2	Q13617	745 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	DCAF4L1	Q3SXM0	396 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	C17orf99	Q6UX52	265 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	SAPCD2	Q86UD0	394 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	RPUSD2	Q8IZ73	545 aa	Known RBP	13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	LRRC71	Q8N4P6	559 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	MMGT1	Q8N4V1	131 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	TPCN2	Q8NHX9	752 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	LNX1	Q8TBB1	728 aa	Predicted RBP	13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	SEMA4D	Q92854	862 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	VCPIP1	Q96JH7	1222 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	PLVAP	Q9BX97	442 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	RPF1	Q9H9Y2	349 aa	Known RBP	13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	PTPRH	Q9HD43	1115 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	NOCT	Q9UK39	431 aa	Known RBP	13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	AMFR	Q9UKV5	643 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	CNTN6	Q9UQ52	1028 aa		13.81	□□□□□ -0.2
SLTM-222	ENST00000560494	F2	P00734	622 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	KRT5	P13647	590 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	HSPA6	P17066	643 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	SMPD1	P17405	629 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	AXL	P30530	894 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	ATIC	P31939	592 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	TNNC1	P63316	161 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	GPS2	Q13227	327 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	NCOA4	Q13772	614 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	GRIK4	Q16099	956 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	TDRD10	Q5VZ19	366 aa	Known RBP	13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	FBXO38	Q6PIJ6	1188 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	DAAM2	Q86T65	1068 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	EFCAB3	Q8N7B9	438 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	UBL4B	Q8N7F7	174 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	KREMEN1	Q96MU8	473 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	SCLT1	Q96NL6	688 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	TLR10	Q9BXR5	811 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	R3HDML	Q9H3Y0	253 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	RNPEP	Q9H4A4	650 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	PDE11A	Q9HCR9	933 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	CPA4	Q9UI42	421 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	GTF3C4	Q9UKN8	822 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	DERA	Q9Y315	318 aa		13.8	□□□□□ -0.2
SLTM-222	ENST00000560494		V9GYY5	206 aa	Predicted RBP	13.8	□□□□□ -0.2
SLTM-222	ENST00000560494	SMIM35	A0A1B0GVV1	85 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	CCDC188	H7C350	402 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	TNPO2	O14787	897 aa	Known RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	FAM189A1	O60320	539 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	KIF4A	O95239	1232 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	LSM8	O95777	96 aa	Known RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	ASS1	P00966	412 aa	Known RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	CLCN3	P51790	818 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	NOP14	P78316	857 aa	Known RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	LIN9	Q5TKA1	542 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	ACAD10	Q6JQN1	1059 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	TLK2	Q86UE8	772 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	CREG2	Q8IUH2	290 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	LRRC57	Q8N9N7	239 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	NPLOC4	Q8TAT6	608 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	ACTRT1	Q8TDG2	376 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	NLRP7	Q8WX94	980 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	USP6NL	Q92738	828 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	PKNOX2	Q96KN3	472 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	RPS6KC1	Q96S38	1066 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	POP1	Q99575	1024 aa	Known RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	CCDC94	Q9BW85	323 aa	Predicted RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	NIF3L1	Q9GZT8	377 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	PLEKHA5	Q9HAU0	1116 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	NMRK2	Q9NPI5	230 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	AVEN	Q9NQS1	362 aa	Predicted RBP	13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	TFR2	Q9UP52	801 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	CEP83	Q9Y592	693 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	TLL2	Q9Y6L7	1015 aa		13.79	□□□□□ -0.2
SLTM-222	ENST00000560494	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
SLTM-222	ENST00000560494	ABLIM1	O14639	778 aa		13.78	□□□□□ -0.2
SLTM-222	ENST00000560494	CYP26A1	O43174	497 aa		13.78	□□□□□ -0.2
SLTM-222	ENST00000560494	CLSTN1	O94985	981 aa		13.78	□□□□□ -0.2
SLTM-222	ENST00000560494	FTL	P02792	175 aa	Predicted RBP	13.78	□□□□□ -0.2
SLTM-222	ENST00000560494	AKR1A1	P14550	325 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms