RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MAGEA9P43362 315 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 FOSBP53539 338 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 EVCP57679 992 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 POU5F1BQ06416 359 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 ZNF528Q3MIS6 628 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 NOSTRINQ8IVI9 506 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 NPAS3Q8IXF0 933 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 MAML2Q8IZL2 1156 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 GSTCDQ8NEC7 633 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 LNX1Q8TBB1 728 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 GPRC5CQ9NQ84 441 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 ANKEF1Q9NU02 776 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 PRMT7Q9NVM4 692 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 MRPS17Q9Y2R5 130 aaKnown RBP11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
CDC42BPB-207ENST00000560492 ZMYM2Q9UBW7 1377 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 PDCD11Q14690 1871 aaKnown RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 A0A1B0GUA9 196 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRRG1O14668 218 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 TARSP26639 723 aaKnown RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 HOXA9P31269 272 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 ELF1P32519 619 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 KRT2P35908 639 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 RARRES1P49788 294 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 ARPP19P56211 112 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 LMNB2Q03252 620 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRPF4BQ13523 1007 aaKnown RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 LPAL2Q16609 132 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 GLRA4Q5JXX5 417 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 RSPO2Q6UXX9 243 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 ZNF852Q6ZMS4 543 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 NELL2Q99435 816 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 NFKBIZQ9BYH8 718 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 BRD9Q9H8M2 597 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 ZSWIM6Q9HCJ5 1215 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 HEBP1Q9NRV9 189 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 DNMT3BQ9UBC3 853 aaKnown RBP11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 CDY1Q9Y6F8 540 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 NOTCH4Q99466 2003 aa11.58□□□□□ -0.56
CDC42BPB-207ENST00000560492 DCDC2BA2VCK2 349 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PTGESO14684 152 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 NEMFO60524 1076 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 KRT37O76014 449 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 B3GAT3O94766 335 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRKCBP05771 671 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 SPIRE1Q08AE8 756 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 NR5A1Q13285 461 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 GRM2Q14416 872 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PPP2R5DQ14738 602 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 MAPK6Q16659 721 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRR23BQ6ZRT6 265 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 MCPH1Q8NEM0 835 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 DEPTORQ8TB45 409 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 WASF1Q92558 559 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 BORCS6Q96GS4 357 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRIMPOLQ96LW4 560 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 DDX23Q9BUQ8 820 aaKnown RBP11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 C2orf40Q9H1Z8 148 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PDZD7Q9H5P4 517 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 ORC3Q9UBD5 711 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 KCNH3Q9ULD8 1083 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 USP20Q9Y2K6 914 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 CACNA1BQ00975 2339 aa11.57□□□□□ -0.56
CDC42BPB-207ENST00000560492 PRR5-ARHGAP8B1AHC4 643 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 I3L4J1 428 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 TRAPPC3O43617 180 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 PAPLNO95428 1278 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 RHOP08100 348 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 CEBPBP17676 345 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 TKTP29401 623 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 ATXN1P54253 815 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 ARHGAP8P85298 464 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 ADCY1Q08828 1119 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 DNAH14Q0VDD8 3507 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 SCRN1Q12765 414 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 RAB33AQ14088 237 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 EARS2Q5JPH6 523 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 CHAMP1Q96JM3 812 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 CORO1BQ9BR76 489 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 STK36Q9NRP7 1315 aa11.56□□□□□ -0.56
CDC42BPB-207ENST00000560492 CITO14578 2027 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 NCOR2Q9Y618 2525 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 ARHGEF35A5YM69 484 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 TBC1D4O60343 1298 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 ECI2O75521 394 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 LYPLA2O95372 231 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 PTPN2P17706 415 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 CLCNKBP51801 687 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 SPEM2Q0P670 501 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 MTAPQ13126 283 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 TRIM29Q14134 588 aa11.55□□□□□ -0.56
CDC42BPB-207ENST00000560492 DCAF4L1Q3SXM0 396 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms