RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 WNT8BQ93098 351 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 JAKMIP2Q96AA8 810 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 SPAG5Q96R06 1193 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 TRAIPQ9BWF2 469 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 STK33Q9BYT3 514 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 IMPG2Q9BZV3 1241 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 NLRC4Q9NPP4 1024 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 KCND1Q9NSA2 647 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 AIPL1Q9NZN9 384 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 C2CD2Q9Y426 696 aa9.3□□□□□ -0.92
TRAF3-209ENST00000560463 BZW2Q9Y6E2 419 aaKnown RBP9.3□□□□□ -0.92
TRAF3-209ENST00000560463 LRRC53A6NM62 1247 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 LACTBL1A8MY62 500 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PITPNM1O00562 1244 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 EPHB6O15197 1021 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 XPOTO43592 962 aaKnown RBP9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PHACTR2O75167 634 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PARNO95453 639 aaKnown RBP9.29□□□□□ -0.92
TRAF3-209ENST00000560463 HLA-DRAP01903 254 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 SERPING1P05155 500 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 CXCL8P10145 99 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 SKIP12755 728 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 ACTN1P12814 892 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 STAT1P42224 750 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 GJA8P48165 433 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 RAB27AP51159 221 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 MFAP3P55082 362 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 JAM2P57087 298 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 GCNT1Q02742 428 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 GOLGA8FQ08AF8 430 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 GOLGA8DPQ0D2H9 430 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PAK2Q13177 524 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 BIRC3Q13489 604 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 SLC10A6Q3KNW5 377 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 UBXN11Q5T124 520 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 ZNF618Q5T7W0 954 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TDRD10Q5VZ19 366 aaKnown RBP9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TWF2Q6IBS0 349 aaKnown RBP9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PHLDB3Q6NSJ2 640 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 SLC39A5Q6ZMH5 540 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 ANKRD33Q7Z3H0 272 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TAS1R2Q8TE23 839 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TAF4BQ92750 862 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 FAXDC2Q96IV6 333 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TOX2Q96NM4 488 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 NT5C1BQ96P26 610 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TRPV6Q9H1D0 765 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 ERVK-5Q9HDB9 667 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 C1orf112Q9NSG2 853 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
TRAF3-209ENST00000560463 DNAJC12Q9UKB3 198 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PADI3Q9ULW8 664 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.29□□□□□ -0.92
TRAF3-209ENST00000560463 FHOD1Q9Y613 1164 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PTPRDP23468 1912 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PTPRSQ13332 1948 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 PTPRJQ12913 1337 aa9.29□□□□□ -0.92
TRAF3-209ENST00000560463 TSC2P49815 1807 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 SSU72P8A0A1W2PR75 194 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 DCDC2CA8MYV0 355 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 ZSCAN12O43309 604 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 ZNF500O60304 480 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 ZNF623O75123 536 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 VNN1O95497 513 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 MYCP01106 439 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 SELPP16109 830 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 FERP16591 822 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 TBXAS1P24557 533 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 ANXA13P27216 316 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 CYLC1P35663 651 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 PRKCIP41743 596 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 PIK3CAP42336 1068 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 WNT7BP56706 349 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 TFAMQ00059 246 aaKnown RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 TRPC3Q13507 836 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 RAPGEF1Q13905 1077 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 LPIN1Q14693 890 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 TMEM132DQ14C87 1099 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 SGSM1Q2NKQ1 1148 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 LMBRD2Q68DH5 695 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 IQCEQ6IPM2 695 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 TRAPPC11Q7Z392 1133 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 TMEM192Q8IY95 271 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 OR5B17Q8NGF7 314 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 SEMA4DQ92854 862 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 FTHL17Q9BXU8 183 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 EIF2AQ9BY44 585 aaKnown RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 FAM124BQ9H5Z6 455 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 UBE2TQ9NPD8 197 aaPredicted RBP9.28□□□□□ -0.92
TRAF3-209ENST00000560463 SNTG2Q9NY99 539 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 ITGA11Q9UKX5 1188 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 NLRC5Q86WI3 1866 aa9.28□□□□□ -0.92
TRAF3-209ENST00000560463 KIAA1671Q9BY89 1806 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 GOLGA6L9A6NEM1 432 aa9.27□□□□□ -0.93
TRAF3-209ENST00000560463 F8VZ95 297 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms