RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 ARHGDIAP52565 204 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 KCNA1Q09470 495 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 IL31Q6EBC2 164 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 INTS5Q6P9B9 1019 aaKnown RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 KDELC2Q7Z4H8 507 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 ARRDC4Q8NCT1 418 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 PRMT6Q96LA8 375 aaPredicted RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 MAP3K14Q99558 947 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 APOBEC2Q9Y235 224 aaKnown RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 PXDNLA1KZ92 1463 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 KIAA1210Q9ULL0 1709 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 ATP9BO43861 1147 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 EEF1B2P24534 225 aaKnown RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 CHRNA3P32297 505 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 SLC30A5Q8TAD4 765 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 JMJD4Q9H9V9 463 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 PPP1R9AQ9ULJ8 1098 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 PTPRMP28827 1452 aa14.21□□□□□ -0.14
TRAF3-208ENST00000560371 ZNF197O14709 1029 aa14.21□□□□□ -0.14
TRAF3-208ENST00000560371 APRTP07741 180 aa14.21□□□□□ -0.14
TRAF3-208ENST00000560371 FMO5P49326 533 aa14.21□□□□□ -0.14
TRAF3-208ENST00000560371 ANO4Q32M45 955 aa14.21□□□□□ -0.14
TRAF3-208ENST00000560371 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.14
TRAF3-208ENST00000560371 URB1O60287 2271 aaKnown RBP14.21□□□□□ -0.14
TRAF3-208ENST00000560371 PTPRUQ92729 1446 aa14.21□□□□□ -0.14
TRAF3-208ENST00000560371 KCNN4O15554 427 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 PDGFRAP16234 1089 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 SDE2Q6IQ49 451 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 NCLNQ969V3 563 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 AGAP3Q96P47 875 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 FBXO2Q9UK22 296 aaPredicted RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 A0A1W2PQC6 194 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 DCDC2CA8MYV0 355 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 CAP2P40123 477 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 C7orf25Q9BPX7 421 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 LRRIQ1Q96JM4 1722 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 L3MBTL1Q9Y468 752 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 BACE1P56817 501 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 PPP4CP60510 307 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 TRIM55Q9BYV6 548 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 GBA2Q9HCG7 927 aaPredicted RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 ICAM1P05362 532 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 FSCBQ5H9T9 825 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 SYNDIG1Q9H7V2 258 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 PLAAQ9Y263 795 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 A0A0G2JND7 137 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 C17orf102A2RUQ5 167 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 SLC16A3O15427 465 aaKnown RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 MAP4P27816 1152 aaKnown RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 GTF2H3Q13889 308 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 FAM133BQ5BKY9 247 aaKnown RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 TRMT10CQ7L0Y3 403 aaKnown RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 MFN1Q8IWA4 741 aa14.2□□□□□ -0.14
TRAF3-208ENST00000560371 TSPYL2Q9H2G4 693 aaPredicted RBP14.2□□□□□ -0.14
TRAF3-208ENST00000560371 A0A087WUV0 522 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 AP3B1O00203 1094 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 STAG3L1P0CL83 205 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 RPA1P27694 616 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 TYK2P29597 1187 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 TCF7P36402 384 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 HADHAP40939 763 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ARSEP51690 589 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ESRRGP62508 458 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 LBRQ14739 615 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 HPDLQ96IR7 371 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 TRIM15Q9C019 465 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 MROH8Q9H579 483 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ANKEF1Q9NU02 776 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 PPARGC1AQ9UBK2 798 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 HARS2P49590 506 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 TWF1Q12792 350 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 PIGHQ14442 188 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 FOPNLQ96NB1 174 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 PACSIN2Q9UNF0 486 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 B3GAT3O94766 335 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 KRT14P02533 472 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 SLC1A1P43005 524 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 MMP14P50281 582 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 TAF11Q15544 211 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 FASTKD1Q53R41 847 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 DCAF6Q58WW2 860 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 ATP11CQ8NB49 1132 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 CPA5Q8WXQ8 436 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 PABPC5Q96DU9 382 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 FGFR1OP2Q9NVK5 253 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 C3orf70A6NLC5 250 aaPredicted RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 HNRNPCL2B2RXH8 293 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 TEX33O43247 280 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 HNRNPCL1O60812 293 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 DHX40Q8IX18 779 aaKnown RBP14.19□□□□□ -0.14
TRAF3-208ENST00000560371 POLLQ9UGP5 575 aa14.19□□□□□ -0.14
TRAF3-208ENST00000560371 MYO1DO94832 1006 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms