RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 BCAR1P56945 870 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 PAK1Q13153 545 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 ZBTB6Q15916 424 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 EPC2Q52LR7 807 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 SPOUT1Q5T280 376 aaKnown RBP23.65■■□□□ 1.38
SNX1-210ENST00000560260 KCNT2Q6UVM3 1135 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 MLKLQ8NB16 471 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 RABGGTAQ92696 567 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 ZNF576Q9H609 170 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 PDE11AQ9HCR9 933 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 PTPRJQ12913 1337 aa23.65■■□□□ 1.38
SNX1-210ENST00000560260 CASTOR2A6NHX0 329 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 NT5C1B-RDH14C9J2C7 533 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 AKAP3O75969 853 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 GALTP07902 379 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 BMPR1AP36894 532 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 LRRC63Q05C16 580 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 CYP24A1Q07973 514 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 TUSC3Q13454 348 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 ARNTL2Q8WYA1 636 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 SYAP1Q96A49 352 aaPredicted RBP23.64■■□□□ 1.38
SNX1-210ENST00000560260 KIF12Q96FN5 646 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 TSG101Q99816 390 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 TMEM175Q9BSA9 504 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 ASB7Q9H672 318 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 KIAA1586Q9HCI6 787 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 MARCH5Q9NX47 278 aa23.64■■□□□ 1.38
SNX1-210ENST00000560260 PLXNA4Q9HCM2 1894 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 TMEM265A0A087WTH1 108 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 IL18RAPO95256 599 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 IGFBP6P24592 240 aaPredicted RBP23.63■■□□□ 1.37
SNX1-210ENST00000560260 ADAM9Q13443 819 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 CEP135Q66GS9 1140 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 LMBRD2Q68DH5 695 aaPredicted RBP23.63■■□□□ 1.37
SNX1-210ENST00000560260 CD302Q8IX05 232 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 SLC39A11Q8N1S5 342 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 MFSD14AQ96MC6 490 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 ZNF558Q96NG5 402 aa23.63■■□□□ 1.37
SNX1-210ENST00000560260 FAM193BQ96PV7 902 aaPredicted RBP23.63■■□□□ 1.37
SNX1-210ENST00000560260 PRG3Q9Y2Y8 225 aaPredicted RBP23.63■■□□□ 1.37
SNX1-210ENST00000560260 C5orf67F2Z3F1 127 aa23.62■■□□□ 1.37
SNX1-210ENST00000560260 NRP1O14786 923 aa23.62■■□□□ 1.37
SNX1-210ENST00000560260 PSMD6Q15008 389 aa23.62■■□□□ 1.37
SNX1-210ENST00000560260 SKOR2Q2VWA4 1001 aaPredicted RBP23.62■■□□□ 1.37
SNX1-210ENST00000560260 C11orf57Q6ZUT1 292 aaPredicted RBP23.62■■□□□ 1.37
SNX1-210ENST00000560260 SAMD11Q96NU1 681 aa23.62■■□□□ 1.37
SNX1-210ENST00000560260 RWDD2AQ9UIY3 292 aa23.62■■□□□ 1.37
SNX1-210ENST00000560260 RFXAPO00287 272 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 OR1G1P47890 313 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 TMEM132DQ14C87 1099 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 SCARA3Q6AZY7 606 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 FOXR2Q6PJQ5 311 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 SASS6Q6UVJ0 657 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 Q7L0L9 218 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 KLHL23Q8NBE8 558 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 FUCA2Q9BTY2 467 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 UBQLN1Q9UMX0 589 aaKnown RBP23.61■■□□□ 1.37
SNX1-210ENST00000560260 DERAQ9Y315 318 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 RWDD3Q9Y3V2 267 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 C2CD2Q9Y426 696 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 TRANK1O15050 2925 aa23.61■■□□□ 1.37
SNX1-210ENST00000560260 BICDL2A1A5D9 508 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 CETN3O15182 167 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 ITGB1P05556 798 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 RPL13P26373 211 aaKnown RBP23.6■■□□□ 1.37
SNX1-210ENST00000560260 CLCNKBP51801 687 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 FKBP3Q00688 224 aaKnown RBP23.6■■□□□ 1.37
SNX1-210ENST00000560260 TYRO3Q06418 890 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 GRIN2CQ14957 1233 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 ZNF697Q5TEC3 545 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 SPATA1Q5VX52 437 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 CD300LGQ6UXG3 332 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 FAM186BQ8IYM0 893 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 C3orf58Q8NDZ4 430 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 FBXO22Q8NEZ5 403 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 OR5B17Q8NGF7 314 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 GDPD5Q8WTR4 605 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 CCDC127Q96BQ5 260 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 BORCS6Q96GS4 357 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 FAM161BQ96MY7 647 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 POP1Q99575 1024 aaKnown RBP23.6■■□□□ 1.37
SNX1-210ENST00000560260 VN1R3Q9BXE9 311 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 AAASQ9NRG9 546 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 SLC38A7Q9NVC3 462 aa23.6■■□□□ 1.37
SNX1-210ENST00000560260 SYCE3A1L190 88 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 TULP1O00294 542 aaPredicted RBP23.59■■□□□ 1.37
SNX1-210ENST00000560260 PPEF2O14830 753 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 KIF4AO95239 1232 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 DLG4P78352 724 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 STX1AQ16623 288 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 C1orf220Q5T0J3 134 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 CGRRF1Q99675 332 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 PLVAPQ9BX97 442 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 FRMD4BQ9Y2L6 1034 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 FAN1Q9Y2M0 1017 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 PCDHB12Q9Y5F1 795 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 ATG2AQ2TAZ0 1938 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 LRRIQ3A6PVS8 624 aaPredicted RBP23.59■■□□□ 1.37
SNX1-210ENST00000560260 MAPK13O15264 365 aa23.59■■□□□ 1.37
SNX1-210ENST00000560260 LPXNO60711 386 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms