RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FAM78AQ5JUQ0 283 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 PRSS36Q5K4E3 855 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 IL31Q6EBC2 164 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 PDXDC1Q6P996 788 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 Q6ZUG5 572 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 BRF1Q92994 677 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 TRMT61BQ9BVS5 477 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 SLKQ9H2G2 1235 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 ZNF334Q9HCZ1 680 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 RGL1Q9NZL6 768 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 MTRRQ9UBK8 725 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 PCDHA4Q9UN74 947 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 CITO14578 2027 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 K7ESF4 209 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 FOXD2O60548 495 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 PROS1P07225 676 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 IFNAR1P17181 557 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 FGFR3P22607 806 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 CNR2P34972 360 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 ELAVL2Q12926 359 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 NPY5RQ15761 445 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 CENPQQ7L2Z9 268 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 OTUD6AQ7L8S5 288 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 FAM160A2Q8N612 972 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 IRF7Q92985 503 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 TCEAL4Q96EI5 215 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 NFKBIZQ9BYH8 718 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 ZFP14Q9HCL3 533 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 KCNMB3Q9NPA1 279 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 TRPV5Q9NQA5 729 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 CDY1Q9Y6F8 540 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 PIAS3Q9Y6X2 628 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 PCNX2A6NKB5 2137 aa14.2□□□□□ -0.14
RABGGTA-213ENST00000560127 GCN1Q92616 2671 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 ASCC3Q8N3C0 2202 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 ARHGEF37A1IGU5 675 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 HMGB1P09429 215 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 PTPN2P17706 415 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 GLRA2P23416 452 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 GDI1P31150 447 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 ARL2P36404 184 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 CTTNQ14247 550 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 KRT32Q14532 448 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 EPHA7Q15375 998 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 SF3A2Q15428 464 aaKnown RBP14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 AASDHQ4L235 1098 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 VITQ6UXI7 678 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 LONP2Q86WA8 852 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 SPEM1Q8N4L4 309 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 DYDC2Q96IM9 177 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 FAM20AQ96MK3 541 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 ASB16Q96NS5 453 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 RXFP3Q9NSD7 469 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 ITPR1Q14643 2758 aa14.19□□□□□ -0.14
RABGGTA-213ENST00000560127 ABCA7Q8IZY2 2146 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 CACNA1EQ15878 2313 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 PAPSS2O95340 614 aaPredicted RBP14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 THP07101 528 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 CCNE1P24864 410 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 HOXC13P31276 330 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 CCR2P41597 374 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 SPIRE1Q08AE8 756 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 PTGDRQ13258 359 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 INF2Q27J81 1249 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 WDR44Q5JSH3 913 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 HEATR6Q6AI08 1181 aaKnown RBP14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 CD300LGQ6UXG3 332 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 HAS1Q92839 578 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 ZSWIM3Q96MP5 696 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 CORO1BQ9BR76 489 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 ZSWIM4Q9H7M6 989 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 C2orf42Q9NWW7 574 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 SNTG2Q9NY99 539 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 BACE2Q9Y5Z0 518 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 GON4LQ3T8J9 2241 aa14.18□□□□□ -0.14
RABGGTA-213ENST00000560127 NCANO14594 1321 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 NUP210Q8TEM1 1887 aaPredicted RBP14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 TTLL13PA6NNM8 815 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 ARNTLO00327 626 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 RECQL4O94761 1208 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 MICAL2O94851 1124 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 PSMC3P17980 439 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 TKTP29401 623 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 VIPR2P41587 438 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 CCDC6Q16204 474 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 DAGLBQ8NCG7 672 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 NCOA5Q9HCD5 579 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 RBM12Q9NTZ6 932 aaKnown RBP14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 LAMA5O15230 3695 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 PI4KAP42356 2102 aa14.17□□□□□ -0.14
RABGGTA-213ENST00000560127 ZNF638Q14966 1978 aaKnown RBP14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 C1QTNF9BB2RNN3 333 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 TMEM189-UBE2V1I3L0A0 370 aa14.16□□□□□ -0.14
RABGGTA-213ENST00000560127 AXIN1O15169 862 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms