RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LINC00854A0A1B0GVQ3 168 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 C11orf74Q86VG3 221 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 RNF26Q9BY78 433 aaPredicted RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 NMRK1Q9NWW6 199 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 FAM153AQ9UHL3 310 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 UBTFL6P0CB48 400 aaPredicted RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 KRT20P35900 424 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 CSNK2BP67870 215 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 COBLL1Q53SF7 1204 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF786Q8N393 782 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 F8W810 466 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 SEMA3EO15041 775 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 STX4Q12846 297 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 PMF1Q6P1K2 205 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCDC17Q96LX7 622 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 ADI1Q9BV57 179 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 TOPORSQ9NS56 1045 aaPredicted RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 HDAC6Q9UBN7 1215 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 RPS6KB2Q9UBS0 482 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 TJP2Q9UDY2 1190 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 MTMR6Q9Y217 621 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 NDUFS3O75489 264 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 VHLP40337 213 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 NDUFAF6Q330K2 333 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCDC137Q6PK04 289 aaKnown RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 DDX53Q86TM3 631 aaKnown RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 SHCBP1Q8NEM2 672 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZCWPW1Q9H0M4 648 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 SLC9A2Q9UBY0 812 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 GMEB1Q9Y692 573 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 ANKRD65E5RJM6 399 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 GYS1P13807 737 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 SDC4P31431 198 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 EIF2S3P41091 472 aaKnown RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 SDR42E1Q8WUS8 393 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 HIC2Q96JB3 615 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 CAAP1Q9H8G2 361 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 PARVAQ9NVD7 372 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 AIM2O14862 343 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 CHI3L1P36222 383 aaPredicted RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCT3P49368 545 aaKnown RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 SERPINB9P50453 376 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRIM32Q13049 653 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 MTFR1Q15390 333 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 C12orf60Q5U649 245 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 FBXO42Q6P3S6 717 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 PRPF39Q86UA1 669 aaKnown RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 REXO4Q9GZR2 422 aaKnown RBP14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 PPCSQ9HAB8 311 aa14.53□□□□□ -0.08
CSPG4P12-202ENST00000559989 ALDH1A2O94788 518 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 ACADSP16219 412 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 MARK3P27448 753 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 HNMTP50135 292 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRIP10Q15642 601 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 PROM2Q8N271 834 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 PHACTR1Q9C0D0 580 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 CAND2O75155 1236 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 H2AFYO75367 372 aaKnown RBP14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 UGP2Q16851 508 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRIM65Q6PJ69 517 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 LCORLQ8N3X6 602 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 CLMNQ96JQ2 1002 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 HMG20AQ9NP66 347 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 VTA1Q9NP79 307 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 VAV3Q9UKW4 847 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 USP15Q9Y4E8 981 aaPredicted RBP14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 NDUFB5O43674 189 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 RGS4P49798 205 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 SCRN1Q12765 414 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 PWP1Q13610 501 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 PLEKHA7Q6IQ23 1121 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 CYP39A1Q9NYL5 469 aa14.52□□□□□ -0.08
CSPG4P12-202ENST00000559989 CNOT3O75175 753 aaKnown RBP14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 TGFBR2P37173 567 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 DPCR1Q3MIW9 517 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF790Q6PG37 636 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 CENPLQ8N0S6 344 aaPredicted RBP14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 TRABDQ9H4I3 376 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARHGEF38Q9NXL2 777 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 TMCC3Q9ULS5 477 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 CCNE1P24864 410 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARSEP51690 589 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 SLC27A3Q5K4L6 730 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 FKBP14Q9NWM8 211 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 AKT1P31749 480 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF438Q7Z4V0 828 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 RHOT1Q8IXI2 618 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 FRMD6Q96NE9 622 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 ITGB1BP2Q9UKP3 347 aa14.52□□□□□ -0.09
CSPG4P12-202ENST00000559989 ALDH1A1P00352 501 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 HSD17B4P51659 736 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 HIST2H2ACQ16777 129 aaPredicted RBP14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 IZUMO3Q5VZ72 239 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 HIST2H2AA3Q6FI13 130 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 SDE2Q6IQ49 451 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 ATP8B4Q8TF62 1192 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 VMP1Q96GC9 406 aa14.51□□□□□ -0.09
CSPG4P12-202ENST00000559989 CNPY3Q9BT09 278 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms