RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 ANK1P16157 1881 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 FNDC1Q4ZHG4 1894 aaPredicted RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 GRXCR1A8MXD5 290 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 XPOTO43592 962 aaKnown RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 KCNE1P15382 129 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 RABGGTBP53611 331 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 DCAF17Q5H9S7 520 aaPredicted RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 HABP4Q5JVS0 413 aaKnown RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 LUZP1Q86V48 1076 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 RNF214Q8ND24 703 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 ANKRD20A12PQ8NF67 263 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 TMC2Q8TDI7 906 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 CNOT6LQ96LI5 555 aaKnown RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 TSPAN18Q96SJ8 248 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 MRPL9Q9BYD2 267 aaKnown RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 MMRN2Q9H8L6 949 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 SLC38A7Q9NVC3 462 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 CNTN3Q9P232 1028 aa15.54■□□□□ 0.08
SMAD6-204ENST00000559931 R3HCC1Q9Y3T6 440 aaKnown RBP15.54■□□□□ 0.08
SMAD6-204ENST00000559931 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 A0A1W2PPC1 479 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 KCNJ18B7U540 433 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 PTGESO14684 152 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 MEFVO15553 781 aaPredicted RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 STX10O60499 249 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 PHACTR2O75167 634 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 TNNC2P02585 160 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 NFICP08651 508 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 TMEM191BP0C7N4 346 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 WNT7BP56706 349 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 BFSP1Q12934 665 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 GRIK3Q13003 919 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 KCNJ12Q14500 433 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 IQCB1Q15051 598 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 XKR4Q5GH76 650 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 LMBRD2Q68DH5 695 aaPredicted RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 CMTR2Q8IYT2 770 aaKnown RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 FIBCD1Q8N539 461 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 BEST2Q8NFU1 509 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 PARD3BQ8TEW8 1205 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 RSPH1Q8WYR4 309 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 C18orf25Q96B23 403 aaPredicted RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 ZMAT2Q96NC0 199 aaKnown RBP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 CGRRF1Q99675 332 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 TBC1D13Q9NVG8 400 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 DERAQ9Y315 318 aa15.53■□□□□ 0.08
SMAD6-204ENST00000559931 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMAD6-204ENST00000559931 LRRIQ3A6PVS8 624 aaPredicted RBP15.52■□□□□ 0.08
SMAD6-204ENST00000559931 PES1O00541 588 aaKnown RBP15.52■□□□□ 0.08
SMAD6-204ENST00000559931 TPM2P07951 284 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 TRIM49P0CI25 452 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 TRIM49CP0CI26 452 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 DLG4P78352 724 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 NCAPHQ15003 741 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 FAM109BQ6ICB4 259 aaPredicted RBP15.52■□□□□ 0.08
SMAD6-204ENST00000559931 NT5DC4Q86YG4 428 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 IRF2BP1Q8IU81 584 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 WDR49Q8IV35 697 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 LRRC43Q8N309 656 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 GSTCDQ8NEC7 633 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 ZNF689Q96CS4 500 aaPredicted RBP15.52■□□□□ 0.08
SMAD6-204ENST00000559931 BORCS6Q96GS4 357 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 PPP1R10Q96QC0 940 aaKnown RBP15.52■□□□□ 0.08
SMAD6-204ENST00000559931 INTS13Q9NVM9 706 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 DPP3Q9NY33 737 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 UBQLN1Q9UMX0 589 aaKnown RBP15.52■□□□□ 0.08
SMAD6-204ENST00000559931 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 C2CD2Q9Y426 696 aa15.52■□□□□ 0.08
SMAD6-204ENST00000559931 RALGAPA2Q2PPJ7 1873 aa15.52■□□□□ 0.07
SMAD6-204ENST00000559931 PDCD11Q14690 1871 aaKnown RBP15.51■□□□□ 0.07
SMAD6-204ENST00000559931 INPPL1O15357 1258 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMAD6-204ENST00000559931 CLSTN1O94985 981 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 ALDH2P05091 517 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 KRT19P08727 400 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
SMAD6-204ENST00000559931 EEF1GP26641 437 aaKnown RBP15.51■□□□□ 0.07
SMAD6-204ENST00000559931 GCLMP48507 274 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 AP3M2P53677 418 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 HTRA4P83105 476 aaPredicted RBP15.51■□□□□ 0.07
SMAD6-204ENST00000559931 TUSC3Q13454 348 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 BIRC3Q13489 604 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 TCP11X2Q5H9J9 407 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 ZNF280BQ86YH2 543 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 EFCAB13Q8IY85 973 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 PLEKHO2Q8TD55 490 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 TUBGCP2Q9BSJ2 902 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 MTMR12Q9C0I1 747 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 LAMA3Q16787 3333 aa15.51■□□□□ 0.07
SMAD6-204ENST00000559931 CASTOR2A6NHX0 329 aa15.5■□□□□ 0.07
SMAD6-204ENST00000559931 SOX1O00570 391 aaPredicted RBP15.5■□□□□ 0.07
SMAD6-204ENST00000559931 DDHD2O94830 711 aa15.5■□□□□ 0.07
SMAD6-204ENST00000559931 MYOGP15173 224 aa15.5■□□□□ 0.07
SMAD6-204ENST00000559931 OR1G1P47890 313 aa15.5■□□□□ 0.07
SMAD6-204ENST00000559931 ALDH7A1P49419 539 aaKnown RBP15.5■□□□□ 0.07
SMAD6-204ENST00000559931 GUCY2FP51841 1108 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms