RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ITIH3Q06033 890 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 SLFN12LQ6IEE8 588 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 TAS1R3Q7RTX0 852 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 ZNF572Q7Z3I7 529 aaPredicted RBP19.18■□□□□ 0.66
SNX1-208ENST00000559844 ASAP3Q8TDY4 903 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 TMEM143Q96AN5 459 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 ZNF446Q9NWS9 450 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 RNF14Q9UBS8 474 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 COQ4Q9Y3A0 265 aa19.18■□□□□ 0.66
SNX1-208ENST00000559844 LRRIQ3A6PVS8 624 aaPredicted RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 ERLIN1O75477 346 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 PIGRP01833 764 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 PTPN11Q06124 597 aaPredicted RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 MTHFD1LQ6UB35 978 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 SLC39A5Q6ZMH5 540 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 SLC43A3Q8NBI5 491 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 SYT11Q9BT88 431 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 TMEM134Q9H6X4 195 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 ARFGAP3Q9NP61 516 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 STYXL1Q9Y6J8 313 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 ZNF233A6NK53 670 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 TREHO43280 583 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 GAS2O43903 313 aaKnown RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 EXTL3O43909 919 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 MAFO75444 373 aaPredicted RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 ZRANB2O95218 330 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNX1-208ENST00000559844 TNFAIP3P21580 790 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 MCM3P25205 808 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 ADAM17P78536 824 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 CC2D1AQ6P1N0 951 aaPredicted RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 ARHGEF19Q8IW93 802 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 METTL13Q8N6R0 699 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 LNX1Q8TBB1 728 aaPredicted RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 CCDC127Q96BQ5 260 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 ARID3AQ99856 593 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 TLR10Q9BXR5 811 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 SUGCTQ9HAC7 445 aa19.17■□□□□ 0.66
SNX1-208ENST00000559844 TRMT13Q9NUP7 481 aaKnown RBP19.17■□□□□ 0.66
SNX1-208ENST00000559844 MBLAC1A4D2B0 266 aaPredicted RBP19.16■□□□□ 0.66
SNX1-208ENST00000559844 LRRIQ4A6NIV6 560 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 K7ERI5 159 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 ZNF185O15231 689 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 MAGEB2O15479 319 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 PAFAH1B1P43034 410 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 GPC3P51654 580 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 MFAP3P55082 362 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 PTGISQ16647 500 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 CCDC181Q5TID7 509 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 CREG2Q8IUH2 290 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 LRRC71Q8N4P6 559 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 NOA1Q8NC60 698 aaKnown RBP19.16■□□□□ 0.66
SNX1-208ENST00000559844 HNRNPLLQ8WVV9 542 aaKnown RBP19.16■□□□□ 0.66
SNX1-208ENST00000559844 SEZ6LQ9BYH1 1024 aa19.16■□□□□ 0.66
SNX1-208ENST00000559844 SIP14410 1827 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 FOXN3O00409 490 aaPredicted RBP19.15■□□□□ 0.66
SNX1-208ENST00000559844 LDHAP00338 332 aaKnown RBP19.15■□□□□ 0.66
SNX1-208ENST00000559844 RHOXF2BP0C7M4 288 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 CDK7P50613 346 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 MEI1Q5TIA1 1274 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 CCDC70Q6NSX1 233 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 EFCAB12Q6NXP0 572 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 FBXL13Q8NEE6 735 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 TCP11Q8WWU5 503 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 FAM81BQ96LP2 452 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 RHOXF2Q9BQY4 288 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 NOD1Q9Y239 953 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 GRID2IPA4D2P6 1211 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 GLYCTKQ8IVS8 523 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 AGPAT1Q99943 283 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 JPH2Q9BR39 696 aaPredicted RBP19.15■□□□□ 0.66
SNX1-208ENST00000559844 FAM213AQ9BRX8 229 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 TRPV6Q9H1D0 765 aa19.15■□□□□ 0.66
SNX1-208ENST00000559844 IGKV6-21A0A0C4DH24 114 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 TARSL2A2RTX5 802 aaKnown RBP19.14■□□□□ 0.65
SNX1-208ENST00000559844 NCK2O43639 380 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 B4GALT4O60513 344 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 PQBP1O60828 265 aaKnown RBP19.14■□□□□ 0.65
SNX1-208ENST00000559844 ZC3H11AO75152 810 aaKnown RBP eCLIP19.14■□□□□ 0.65
SNX1-208ENST00000559844 LRRN2O75325 713 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 TMEM253P0C7T8 217 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 CYP2C9P11712 490 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 NOP2P46087 812 aaKnown RBP19.14■□□□□ 0.65
SNX1-208ENST00000559844 CLCN3P51790 818 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 IER5Q5VY09 327 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 RUFY4Q6ZNE9 571 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 UBE2Q1Q7Z7E8 422 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 OLIG1Q8TAK6 271 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 COG1Q8WTW3 980 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 NT5C1BQ96P26 610 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 RAB20Q9NX57 234 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 AGO2Q9UKV8 859 aaKnown RBP19.14■□□□□ 0.65
SNX1-208ENST00000559844 MROH7Q68CQ1 1323 aa19.14■□□□□ 0.65
SNX1-208ENST00000559844 PDE2AO00408 941 aaPredicted RBP19.13■□□□□ 0.65
SNX1-208ENST00000559844 DRP2Q13474 957 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 PSMD6Q15008 389 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 SNX17Q15036 470 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 TRIM60Q495X7 471 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 WDR93Q6P2C0 686 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 FAM126BQ8IXS8 530 aa19.13■□□□□ 0.65
SNX1-208ENST00000559844 SYCE1Q8N0S2 351 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms