RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 MYADMQ96S97 322 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 TARS2Q9BW92 718 aaKnown RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 PTPRHQ9HD43 1115 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 MTRRQ9UBK8 725 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 SLC16A4O15374 487 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 TOM1L1O75674 476 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 POU2F2P09086 479 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 LAMP2P13473 410 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 RFX1P22670 979 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 PROZP22891 400 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 RPL9P32969 192 aaKnown RBP13.43□□□□□ -0.26
SPG11-219ENST00000559822 CLCNKBP51801 687 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 OSTNP61366 133 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 MAPK7Q13164 816 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 TAS1R3Q7RTX0 852 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 KCNK18Q7Z418 384 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 TMEM105Q8N8V8 129 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 CEP120Q8N960 986 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 FLCNQ8NFG4 579 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 CALML4Q96GE6 196 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 SNX27Q96L92 541 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 RTP3Q9BQQ7 232 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 CXCL16Q9H2A7 254 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 LARSQ9P2J5 1176 aaKnown RBP13.43□□□□□ -0.26
SPG11-219ENST00000559822 WNT16Q9UBV4 365 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 BACE2Q9Y5Z0 518 aa13.43□□□□□ -0.26
SPG11-219ENST00000559822 CACNA1HO95180 2353 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 PLA2G4BP0C869 781 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 SRFP11831 508 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 KCNE1P15382 129 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 AOC1P19801 751 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 OR1D2P34982 312 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 UBA7P41226 1012 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 SLC12A3P55017 1021 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 RAD51AP2Q09MP3 1159 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 NOLC1Q14978 699 aaKnown RBP eCLIP13.42□□□□□ -0.26
SPG11-219ENST00000559822 LARP1BQ659C4 914 aaKnown RBP13.42□□□□□ -0.26
SPG11-219ENST00000559822 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 ZPBP2Q6X784 338 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 MTSS1LQ765P7 747 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 BRAPQ7Z569 592 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 GRASPQ7Z6J2 395 aaPredicted RBP13.42□□□□□ -0.26
SPG11-219ENST00000559822 SIX5Q8N196 739 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 PNMA5Q96PV4 448 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 GOLGA2P5Q9HBQ8 144 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 CNTN3Q9P232 1028 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 ANKFY1Q9P2R3 1169 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 ODF2LQ9ULJ1 636 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 POLIQ9UNA4 740 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 CDY1Q9Y6F8 540 aa13.42□□□□□ -0.26
SPG11-219ENST00000559822 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 CITO14578 2027 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 SFI1A8K8P3 1242 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 H0Y858 1186 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 H7C4K7 107 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 PODXLO00592 558 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 SYN3O14994 580 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 CLDN3O15551 220 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 MAPTP10636 758 aaKnown RBP13.41□□□□□ -0.26
SPG11-219ENST00000559822 HARSP12081 509 aaKnown RBP13.41□□□□□ -0.26
SPG11-219ENST00000559822 TKTP29401 623 aaKnown RBP13.41□□□□□ -0.26
SPG11-219ENST00000559822 ABCD1P33897 745 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 MATR3P43243 847 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPG11-219ENST00000559822 KYAT1Q16773 422 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 AXDND1Q5T1B0 1012 aaPredicted RBP13.41□□□□□ -0.26
SPG11-219ENST00000559822 CWF19L1Q69YN2 538 aaKnown RBP13.41□□□□□ -0.26
SPG11-219ENST00000559822 SLC44A3Q8N4M1 653 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 TMEM161BQ8NDZ6 487 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 RASSF8Q8NHQ8 419 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 PLIN2Q99541 437 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 CDH7Q9ULB5 785 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 WDFY4Q6ZS81 3184 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 MYH11P35749 1972 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 DOCK8Q8NF50 2099 aa13.41□□□□□ -0.26
SPG11-219ENST00000559822 TRIP11Q15643 1979 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 ANHXE9PGG2 379 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 ABLIM1O14639 778 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 CCL16O15467 120 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 ADAM12O43184 909 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 NARSO43776 548 aaKnown RBP13.4□□□□□ -0.26
SPG11-219ENST00000559822 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
SPG11-219ENST00000559822 CFHP08603 1231 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 ELF1P32519 619 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 BRCC3P46736 316 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 SOX4Q06945 474 aaPredicted RBP13.4□□□□□ -0.26
SPG11-219ENST00000559822 HTR4Q13639 388 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 C3orf58Q8NDZ4 430 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 RSAD2Q8WXG1 361 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 KCNN1Q92952 543 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 BICD1Q96G01 975 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 TBC1D32Q96NH3 1257 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 PLEKHA5Q9HAU0 1116 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 FAM86C1Q9NVL1 165 aa13.4□□□□□ -0.26
SPG11-219ENST00000559822 KCNH3Q9ULD8 1083 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms