RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ADRA1BP35368 520 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 KLF1Q13351 362 aaPredicted RBP5.03□□□□□ -1.6
SPG11-218ENST00000559754 ATP2B3Q16720 1220 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 TSHZ3Q63HK5 1081 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 MAPKAPK5Q8IW41 473 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 CMTR2Q8IYT2 770 aaKnown RBP5.03□□□□□ -1.6
SPG11-218ENST00000559754 FAM43AQ8N2R8 423 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 FBXO18Q8NFZ0 1043 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 GPR150Q8NGU9 434 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 COG1Q8WTW3 980 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 CAVIN3Q969G5 261 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 NEU1Q99519 415 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 PUS7LQ9H0K6 701 aaKnown RBP5.03□□□□□ -1.6
SPG11-218ENST00000559754 SPC25Q9HBM1 224 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 KLHL11Q9NVR0 708 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 AJAP1Q9UKB5 411 aaPredicted RBP5.03□□□□□ -1.6
SPG11-218ENST00000559754 MAP3K2Q9Y2U5 619 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 PHLDB1Q86UU1 1377 aa5.03□□□□□ -1.6
SPG11-218ENST00000559754 UNC119BA6NIH7 251 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 TRIM75PA6NK02 468 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 GPR32O75388 356 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 NUDT3O95989 172 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 ALDH1A3P47895 512 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 TP53BP2Q13625 1128 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 ERCC6LQ2NKX8 1250 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 ZNF529Q6P280 563 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 SEM1Q6ZVN7 128 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 NECAB2Q7Z6G3 386 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 ZNF575Q86XF7 245 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 TMEM132CQ8N3T6 1108 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 STON2Q8WXE9 905 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 LINC00476Q8WZB0 136 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 SLC9A6Q92581 669 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 ADAM2Q99965 735 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 C7orf25Q9BPX7 421 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 RIOX1Q9H6W3 641 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 ZNF277Q9NRM2 450 aaPredicted RBP5.02□□□□□ -1.61
SPG11-218ENST00000559754 SYBUQ9NX95 663 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 SAP30BPQ9UHR5 308 aaKnown RBP5.02□□□□□ -1.61
SPG11-218ENST00000559754 ZNHIT2Q9UHR6 403 aa5.02□□□□□ -1.61
SPG11-218ENST00000559754 A0A1B0GTW7 788 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 SPDEFO95238 335 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 EGR2P11161 476 aaPredicted RBP5.01□□□□□ -1.61
SPG11-218ENST00000559754 GCSHP23434 173 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 SEPT2Q15019 361 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 RNF187Q5TA31 235 aaPredicted RBP5.01□□□□□ -1.61
SPG11-218ENST00000559754 STRIP1Q5VSL9 837 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 FOXR2Q6PJQ5 311 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 CCHCR1Q8TD31 782 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 LDAHQ9H6V9 325 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 SLC5A4Q9NY91 659 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 SIK3Q9Y2K2 1263 aa5.01□□□□□ -1.61
SPG11-218ENST00000559754 ZAR1LA6NP61 321 aa5□□□□□ -1.61
SPG11-218ENST00000559754 GPANK1O95872 356 aa5□□□□□ -1.61
SPG11-218ENST00000559754 ITGAMP11215 1152 aa5□□□□□ -1.61
SPG11-218ENST00000559754 CKBP12277 381 aa5□□□□□ -1.61
SPG11-218ENST00000559754 POU3F3P20264 500 aaPredicted RBP5□□□□□ -1.61
SPG11-218ENST00000559754 WASP42768 502 aa5□□□□□ -1.61
SPG11-218ENST00000559754 SLC6A9P48067 706 aa5□□□□□ -1.61
SPG11-218ENST00000559754 SEC24CP53992 1094 aa5□□□□□ -1.61
SPG11-218ENST00000559754 CREMQ03060 361 aa5□□□□□ -1.61
SPG11-218ENST00000559754 CLUL1Q15846 466 aa5□□□□□ -1.61
SPG11-218ENST00000559754 OLFML1Q6UWY5 402 aa5□□□□□ -1.61
SPG11-218ENST00000559754 DDX42Q86XP3 938 aaKnown RBP eCLIP5□□□□□ -1.61
SPG11-218ENST00000559754 FITM2Q8N6M3 262 aa5□□□□□ -1.61
SPG11-218ENST00000559754 CNTD1Q8N815 330 aa5□□□□□ -1.61
SPG11-218ENST00000559754 NLGN4YQ8NFZ3 816 aaPredicted RBP5□□□□□ -1.61
SPG11-218ENST00000559754 BOD1Q96IK1 185 aa5□□□□□ -1.61
SPG11-218ENST00000559754 ALOXE3Q9BYJ1 711 aa5□□□□□ -1.61
SPG11-218ENST00000559754 TESQ9UGI8 421 aaKnown RBP5□□□□□ -1.61
SPG11-218ENST00000559754 KCNE5Q9UJ90 142 aa5□□□□□ -1.61
SPG11-218ENST00000559754 ACTL7AQ9Y615 435 aa5□□□□□ -1.61
SPG11-218ENST00000559754 EPN1Q9Y6I3 576 aaPredicted RBP5□□□□□ -1.61
SPG11-218ENST00000559754 WNT10BO00744 389 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 EIF5BO60841 1220 aaKnown RBP4.99□□□□□ -1.61
SPG11-218ENST00000559754 ELANEP08246 267 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 DDCP20711 480 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 FPR1P21462 350 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 FGFR4P22455 802 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 FDXRP22570 491 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 PCSK1P29120 753 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 SLC16A1P53985 500 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 OCA2Q04671 838 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 MPP3Q13368 585 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 MTM1Q13496 603 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 B3GNTL1Q67FW5 361 aaPredicted RBP4.99□□□□□ -1.61
SPG11-218ENST00000559754 DPY19L2P1Q6NXN4 242 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 PGM2L1Q6PCE3 622 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 MIGA2Q7L4E1 593 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 NUP133Q8WUM0 1156 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 ASB10Q8WXI3 467 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 GALNT9Q9HCQ5 603 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 TMEM74BQ9NUR3 256 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 TBCCD1Q9NVR7 557 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 MKS1Q9NXB0 559 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 SLC23A1Q9UHI7 598 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 ATP8A1Q9Y2Q0 1164 aa4.99□□□□□ -1.61
SPG11-218ENST00000559754 MYBBP1AQ9BQG0 1328 aaKnown RBP4.98□□□□□ -1.61
SPG11-218ENST00000559754 ESRRBO95718 433 aa4.98□□□□□ -1.61
SPG11-218ENST00000559754 CXADRP78310 365 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms