RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 HOXA2O43364 376 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 NR3C1P04150 777 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 CCNE1P24864 410 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 PBX3P40426 434 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 SLC11A1P49279 550 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 FXR1P51114 621 aaKnown RBP eCLIP9.84□□□□□ -0.83
HMG20A-209ENST00000559728 NLRP12P59046 1061 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 SPAG1Q07617 926 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 BTG3Q14201 252 aaPredicted RBP9.84□□□□□ -0.83
HMG20A-209ENST00000559728 RAB30Q15771 203 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 EDRF1Q3B7T1 1238 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 FOXR2Q6PJQ5 311 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 BRSK2Q8IWQ3 736 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 EFCAB13Q8IY85 973 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 GPD1LQ8N335 351 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 P2RX5Q93086 422 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 C18orf25Q96B23 403 aaPredicted RBP9.84□□□□□ -0.83
HMG20A-209ENST00000559728 TIFAQ96CG3 184 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 DHTKD1Q96HY7 919 aaPredicted RBP9.84□□□□□ -0.83
HMG20A-209ENST00000559728 MFSD14AQ96MC6 490 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 PAAF1Q9BRP4 392 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 C17orf80Q9BSJ5 609 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 CCDC94Q9BW85 323 aaPredicted RBP9.84□□□□□ -0.83
HMG20A-209ENST00000559728 CGNQ9P2M7 1197 aaKnown RBP9.84□□□□□ -0.83
HMG20A-209ENST00000559728 INPP5FQ9Y2H2 1132 aa9.84□□□□□ -0.83
HMG20A-209ENST00000559728 C5orf67F2Z3F1 127 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 KIAA0391O15091 583 aaKnown RBP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 LPXNO60711 386 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 KIF20AO95235 890 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 GALTP07902 379 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 NFICP08651 508 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 MATR3P43243 847 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 CYP2J2P51589 502 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 ERVK-21P61565 698 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 SNRNP35Q16560 246 aaKnown RBP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 KYAT1Q16773 422 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 VARS2Q5ST30 1063 aaKnown RBP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 JADE1Q6IE81 842 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 KLHL10Q6JEL2 608 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 C11orf57Q6ZUT1 292 aaPredicted RBP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 HS2ST1Q7LGA3 356 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 IRF2BP1Q8IU81 584 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 LRRC43Q8N309 656 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 FIBCD1Q8N539 461 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 MLKLQ8NB16 471 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 XXYLT1Q8NBI6 393 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 GOLGA5Q8TBA6 731 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 NELFBQ8WX92 580 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 RSPH1Q8WYR4 309 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 ZNF516Q92618 1163 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 VN1R3Q9BXE9 311 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 GTPBP4Q9BZE4 634 aaKnown RBP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 ASB7Q9H672 318 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 GOLGA2P5Q9HBQ8 144 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 PDE11AQ9HCR9 933 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 MARCH5Q9NX47 278 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 RBAKQ9NYW8 714 aaPredicted RBP9.83□□□□□ -0.84
HMG20A-209ENST00000559728 TUBGCP4Q9UGJ1 667 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 CTNND2Q9UQB3 1225 aa9.83□□□□□ -0.84
HMG20A-209ENST00000559728 PSMA7O14818 248 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 PPEF2O14830 753 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 CALUO43852 315 aaPredicted RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 LDHAP00338 332 aaKnown RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 ITGB1P05556 798 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 PTMSP20962 102 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 NR2F2P24468 414 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 DNAJB1P25685 340 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 BMPR1AP36894 532 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 GUCY2FP51841 1108 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 YARSP54577 528 aaKnown RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 BCAR1P56945 870 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 STX17P56962 302 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 DLG4P78352 724 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 CLDN10P78369 228 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 LRRC63Q05C16 580 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 CYP24A1Q07973 514 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 GRIK3Q13003 919 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 PAK1Q13153 545 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 TUSC3Q13454 348 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 CAMK1Q14012 370 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 PSMD6Q15008 389 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 APBB1IPQ7Z5R6 666 aaPredicted RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 HACE1Q8IYU2 909 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 RNF168Q8IYW5 571 aaPredicted RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 SLC39A11Q8N1S5 342 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 COLGALT1Q8NBJ5 622 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 RDH13Q8NBN7 331 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 C3orf58Q8NDZ4 430 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 OR5B17Q8NGF7 314 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 RABGGTAQ92696 567 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 POP1Q99575 1024 aaKnown RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 MRPL9Q9BYD2 267 aaKnown RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 RPF1Q9H9Y2 349 aaKnown RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 TOPORSQ9NS56 1045 aaPredicted RBP9.82□□□□□ -0.84
HMG20A-209ENST00000559728 KANSL3Q9P2N6 904 aa9.82□□□□□ -0.84
HMG20A-209ENST00000559728 RWDD2AQ9UIY3 292 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms