RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ABCD1P33897 745 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 TNFSF9P41273 254 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 MATR3P43243 847 aaKnown RBP eCLIP11.96□□□□□ -0.49
SPG11-216ENST00000559347 CREMQ03060 361 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 E2F4Q16254 413 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 UPP1Q16831 310 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 FOXD4L6Q3SYB3 417 aaPredicted RBP11.96□□□□□ -0.49
SPG11-216ENST00000559347 RARS2Q5T160 578 aaKnown RBP11.96□□□□□ -0.49
SPG11-216ENST00000559347 KIAA1841Q6NSI8 718 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 FOXD4L3Q6VB84 417 aaPredicted RBP11.96□□□□□ -0.49
SPG11-216ENST00000559347 SV2BQ7L1I2 683 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 PDILTQ8N807 584 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 FEZF2Q8TBJ5 459 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 RIN2Q8WYP3 895 aaPredicted RBP11.96□□□□□ -0.49
SPG11-216ENST00000559347 ADAM7Q9H2U9 754 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 EPHX3Q9H6B9 360 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 MAN1C1Q9NR34 630 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.49
SPG11-216ENST00000559347 SLC38A7Q9NVC3 462 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 FNIP2Q9P278 1114 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 SEL1LQ9UBV2 794 aa11.96□□□□□ -0.49
SPG11-216ENST00000559347 DOCK8Q8NF50 2099 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 FRMD3A2A2Y4 597 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 PI4K2BG5E9Z4 385 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 GLUD1P00367 558 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 IGFBP6P24592 240 aaPredicted RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 ELAVL2Q12926 359 aaKnown RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 SLC10A6Q3KNW5 377 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 ZC2HC1CQ53FD0 456 aaPredicted RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 AXDND1Q5T1B0 1012 aaPredicted RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 FAM171A1Q5VUB5 890 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 PRSS55Q6UWB4 352 aaPredicted RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 CD300LGQ6UXG3 332 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 C12orf76Q8N812 135 aaPredicted RBP11.95□□□□□ -0.5
SPG11-216ENST00000559347 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 PIK3R5Q8WYR1 880 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 NECTIN4Q96NY8 510 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 TTPALQ9BTX7 342 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 STRA6Q9BX79 667 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 PANK2Q9BZ23 570 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 POMKQ9H5K3 350 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 C11orf16Q9NQ32 467 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 OLFML3Q9NRN5 406 aa11.95□□□□□ -0.5
SPG11-216ENST00000559347 A0A0B4J269 797 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 TTC26A0AVF1 554 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 TISP43B9A030 160 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 PODXLO00592 558 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 OGTO15294 1046 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 DCXO43602 365 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 B3GAT3O94766 335 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 CLTAP09496 248 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 GAP43P17677 238 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 RPL17P18621 184 aaKnown RBP11.94□□□□□ -0.5
SPG11-216ENST00000559347 MTHFRP42898 656 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 DNM1Q05193 864 aaKnown RBP11.94□□□□□ -0.5
SPG11-216ENST00000559347 PPP2R3AQ06190 1150 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 PSMD5Q16401 504 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 ZBTB41Q5SVQ8 909 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 TMC5Q6UXY8 1006 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 ZNF720Q7Z2F6 126 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 RNF135Q8IUD6 432 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 GLYCTKQ8IVS8 523 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 C18orf25Q96B23 403 aaPredicted RBP11.94□□□□□ -0.5
SPG11-216ENST00000559347 RPGRIP1Q96KN7 1286 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 RIPOR3Q96MK2 946 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 C1QTNF1Q9BXJ1 281 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 TNMDQ9H2S6 317 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 CUEDC2Q9H467 287 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 TUBGCP4Q9UGJ1 667 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 WDFY4Q6ZS81 3184 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 SCN1AP35498 2009 aa11.94□□□□□ -0.5
SPG11-216ENST00000559347 KMT2EQ8IZD2 1858 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 DOCK6Q96HP0 2047 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 ANKRD63C9JTQ0 380 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 TGM5O43548 720 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 C1RP00736 705 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 IDEP14735 1019 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 FGFR3P22607 806 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 SP100P23497 879 aaPredicted RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 TKTP29401 623 aaKnown RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 BRCC3P46736 316 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 CASP5P51878 434 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 ENOX2Q16206 610 aaKnown RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 KYAT1Q16773 422 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 HERC4Q5GLZ8 1057 aaPredicted RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 PDXDC1Q6P996 788 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 DCLRE1AQ6PJP8 1040 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 C15orf39Q6ZRI6 1047 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 GPR149Q86SP6 731 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 CEP57Q86XR8 500 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 TMEM130Q8N3G9 435 aa11.93□□□□□ -0.5
SPG11-216ENST00000559347 CMASQ8NFW8 434 aaPredicted RBP11.93□□□□□ -0.5
SPG11-216ENST00000559347 LNX1Q8TBB1 728 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms